RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 K7ESM1 405 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 GPC4O75487 556 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 DCTN3O75935 186 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 SUPT7LO94864 414 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 SLCO2B1O94956 709 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 ENO2P09104 434 aaPredicted RBP13.46□□□□□ -0.25
IRF3-229ENST00000601373 TBC1D3HP0C7X1 549 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 GPR89BP0CG08 455 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 CD72P21854 359 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 RPL14P50914 215 aaKnown RBP13.46□□□□□ -0.25
IRF3-229ENST00000601373 STARD6P59095 220 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 HSPA14Q0VDF9 509 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 SF3A3Q12874 501 aaKnown RBP eCLIP13.46□□□□□ -0.252e-6■■■□□ 16.7
IRF3-229ENST00000601373 IFT88Q13099 833 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 SETDB1Q15047 1291 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 TGFBIQ15582 683 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 PFKFB4Q16877 469 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 UNC50Q53HI1 259 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 ZNF648Q5T619 568 aaPredicted RBP13.46□□□□□ -0.25
IRF3-229ENST00000601373 SEL1L3Q68CR1 1132 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 ANKS6Q68DC2 871 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 TBC1D3GQ6DHY5 549 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 TBC1D3CQ6IPX1 549 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 FOXR1Q6PIV2 292 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 KIAA1324Q6UXG2 1013 aaKnown RBP13.46□□□□□ -0.25
IRF3-229ENST00000601373 SYT13Q7L8C5 426 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 TBC1D3Q8IZP1 549 aaPredicted RBP13.46□□□□□ -0.25
IRF3-229ENST00000601373 RFWD2Q8NHY2 731 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 NAT14Q8WUY8 206 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 THOC1Q96FV9 657 aaKnown RBP13.46□□□□□ -0.25
IRF3-229ENST00000601373 LINC00615Q96LM1 132 aaPredicted RBP13.46□□□□□ -0.25
IRF3-229ENST00000601373 C1QTNF3Q9BXJ4 246 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 TEX101Q9BY14 249 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 TRIM54Q9BYV2 358 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 WWP1Q9H0M0 922 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 SLC6A17Q9H1V8 727 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 LMAN1LQ9HAT1 526 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 KCNK13Q9HB14 408 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 SGK2Q9HBY8 427 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 ITM2CQ9NQX7 267 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 CD274Q9NZQ7 290 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 VTI1BQ9UEU0 232 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 DCTN4Q9UJW0 460 aa13.46□□□□□ -0.25
IRF3-229ENST00000601373 APOBEC2Q9Y235 224 aaKnown RBP13.46□□□□□ -0.25
IRF3-229ENST00000601373 TNPO3Q9Y5L0 923 aaKnown RBP13.46□□□□□ -0.25
IRF3-229ENST00000601373 DNMT3AQ9Y6K1 912 aaPredicted RBP13.46□□□□□ -0.25
IRF3-229ENST00000601373 KMT2EQ8IZD2 1858 aa13.46□□□□□ -0.26
IRF3-229ENST00000601373 RIF1Q5UIP0 2472 aaKnown RBP13.45□□□□□ -0.26
IRF3-229ENST00000601373 KLHL33A6NCF5 533 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 PABPN1LA6NDY0 278 aaKnown RBP13.45□□□□□ -0.26
IRF3-229ENST00000601373 LRRC72A6NJI9 287 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 LIN7AO14910 233 aaPredicted RBP13.45□□□□□ -0.26
IRF3-229ENST00000601373 PAK4O96013 591 aaPredicted RBP13.45□□□□□ -0.26
IRF3-229ENST00000601373 PCCBP05166 539 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 KITP10721 976 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 ALOX15P16050 662 aaPredicted RBP13.45□□□□□ -0.26
IRF3-229ENST00000601373 VCLP18206 1134 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 GABRG2P18507 467 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 NDUFV2P19404 249 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 ARRB2P32121 409 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 TRIM23P36406 574 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 NBL1P41271 181 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 CTSCP53634 463 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 CDK3Q00526 305 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 SP140Q13342 867 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 BOP1Q14137 746 aaKnown RBP13.45□□□□□ -0.26
IRF3-229ENST00000601373 SYTL3Q4VX76 610 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 SULT1C3Q6IMI6 304 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 METTL2BQ6P1Q9 378 aaKnown RBP13.45□□□□□ -0.26
IRF3-229ENST00000601373 TTC23LQ6PF05 361 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 SBSNQ6UWP8 590 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 FRMD7Q6ZUT3 714 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 TRPM8Q7Z2W7 1104 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 YTHDF3Q7Z739 585 aaKnown RBP13.45□□□□□ -0.26
IRF3-229ENST00000601373 HEATR4Q86WZ0 1026 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 HOMEZQ8IX15 550 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 LSMEM2Q8N112 164 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 ZNF687Q8N1G0 1237 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 PELI3Q8N2H9 469 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 GBP7Q8N8V2 638 aaPredicted RBP13.45□□□□□ -0.26
IRF3-229ENST00000601373 TP53I13Q8NBR0 393 aaPredicted RBP13.45□□□□□ -0.26
IRF3-229ENST00000601373 PLA2G15Q8NCC3 412 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 STON2Q8WXE9 905 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 GLMNQ92990 594 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 TMEM159Q96B96 161 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 FAR2Q96K12 515 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 LENG8Q96PV6 779 aaPredicted RBP13.45□□□□□ -0.26
IRF3-229ENST00000601373 TMEM120AQ9BXJ8 343 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 BTBD1Q9H0C5 482 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 OR2AG1Q9H205 316 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 GSTO2Q9H4Y5 243 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 PHPT1Q9NRX4 125 aaPredicted RBP13.45□□□□□ -0.26
IRF3-229ENST00000601373 FAM86C1Q9NVL1 165 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 PNPOQ9NVS9 261 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 ATXN10Q9UBB4 475 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 MBD1Q9UIS9 605 aaPredicted RBP13.45□□□□□ -0.26
IRF3-229ENST00000601373 FBXL21Q9UKT6 434 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 CA14Q9ULX7 337 aa13.45□□□□□ -0.26
IRF3-229ENST00000601373 SPTBN4Q9H254 2564 aa13.44□□□□□ -0.26
IRF3-229ENST00000601373 ATXN2Q99700 1313 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms