RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 PIPSLA2A3N6 862 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 SGTAO43765 313 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 CRTAMO95727 393 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 SLC35G4P0C7Q5 338 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 EBLN1P0CF75 366 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 RBP3P10745 1247 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 PSMB4P28070 264 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 PTPN7P35236 360 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 EIF3EP60228 445 aaKnown RBP16.58■□□□□ 0.24
SCAF1-204ENST00000601038 XIAPP98170 497 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 TCTN3Q6NUS6 607 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 OOSP2Q86WS3 158 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 CARFQ8N187 725 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 SPDYE1Q8NFV5 336 aaPredicted RBP16.58■□□□□ 0.24
SCAF1-204ENST00000601038 CT55Q8WUE5 264 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 COL26A1Q96A83 441 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 CCM2Q9BSQ5 444 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 GPR87Q9BY21 358 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 OSBPL8Q9BZF1 889 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 TWSG1Q9GZX9 223 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 COLEC10Q9Y6Z7 277 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 BSNQ9UPA5 3926 aa16.58■□□□□ 0.24
SCAF1-204ENST00000601038 MACROD2A1Z1Q3 448 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 CDC14CA4D256 554 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 MKRN2OSH3BPM6 223 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 PJA2O43164 708 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 STK10O94804 968 aaKnown RBP16.57■□□□□ 0.24
SCAF1-204ENST00000601038 ZBTB11O95625 1053 aaPredicted RBP16.57■□□□□ 0.24
SCAF1-204ENST00000601038 NTRK1P04629 796 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 RALBP11234 206 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 CTNNA2P26232 953 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 TUBB4BP68371 445 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 FOXK1P85037 733 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 OLIG2Q13516 323 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 TUBB2AQ13885 445 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 CAPRIN2Q6IMN6 1127 aaKnown RBP16.57■□□□□ 0.24
SCAF1-204ENST00000601038 ARMC6Q6NXE6 501 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 DUS1LQ6P1R4 473 aaKnown RBP16.57■□□□□ 0.24
SCAF1-204ENST00000601038 DARS2Q6PI48 645 aaKnown RBP16.57■□□□□ 0.24
SCAF1-204ENST00000601038 CERS6Q6ZMG9 384 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 CFAP206Q8IYR0 622 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 NAT14Q8WUY8 206 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 HEXDCQ8WVB3 486 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 SEC14L1Q92503 715 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 ULK4Q96C45 1275 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 DCUN1D1Q96GG9 259 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 SPATA13Q96N96 652 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 PPP1R2P1Q96PQ5 205 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 TUBB2BQ9BVA1 445 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 ARNT2Q9HBZ2 717 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 FEZ2Q9UHY8 353 aaPredicted RBP16.57■□□□□ 0.24
SCAF1-204ENST00000601038 CRLS1Q9UJA2 301 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 TP53TG5Q9Y2B4 290 aa16.57■□□□□ 0.24
SCAF1-204ENST00000601038 EPN1Q9Y6I3 576 aaPredicted RBP16.57■□□□□ 0.24
SCAF1-204ENST00000601038 C17orf113A0A1B0GUU1 675 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 CCDC66A2RUB6 948 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 OR6C74A6NCV1 312 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 RCCD1A6NED2 376 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 KCNN4O15554 427 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 POLBP06746 335 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 NDUFS1P28331 727 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 HADHAP40939 763 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 CETN2P41208 172 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 PRLHRP49683 370 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 ZNF140P52738 457 aaPredicted RBP16.56■□□□□ 0.24
SCAF1-204ENST00000601038 PMS2P54278 862 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 RWDD2BP57060 319 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 KLRB1Q12918 225 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 GSE1Q14687 1217 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 DENND5AQ6IQ26 1287 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 TMEM135Q86UB9 458 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 NXPE1Q8N323 547 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 OR13C4Q8NGS5 318 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 OR8K5Q8NH50 307 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 CCDC110Q8TBZ0 833 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 HM13Q8TCT9 377 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 PANX2Q96RD6 677 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 ACTL8Q9H568 366 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 AKIRIN1Q9H9L7 192 aaPredicted RBP16.56■□□□□ 0.24
SCAF1-204ENST00000601038 KCND1Q9NSA2 647 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 FAM8A1Q9UBU6 413 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 HEBP2Q9Y5Z4 205 aa16.56■□□□□ 0.24
SCAF1-204ENST00000601038 BTNL10A8MVZ5 291 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 CFAP99D6REC4 459 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 CPNE3O75131 537 aaKnown RBP16.55■□□□□ 0.24
SCAF1-204ENST00000601038 RFPL1O75677 317 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 ZNF189O75820 626 aaPredicted RBP16.55■□□□□ 0.24
SCAF1-204ENST00000601038 TJP3O95049 919 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 ATP1B2P14415 290 aaPredicted RBP16.55■□□□□ 0.24
SCAF1-204ENST00000601038 ITGALP20701 1170 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 PTPN4P29074 926 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 KPNA2P52292 529 aaKnown RBP16.55■□□□□ 0.24
SCAF1-204ENST00000601038 NAP1L1P55209 391 aaKnown RBP16.55■□□□□ 0.24
SCAF1-204ENST00000601038 KRT33BQ14525 404 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 IGFBP7Q16270 282 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 COLEC12Q5KU26 742 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 TMTC4Q5T4D3 741 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 FAM199XQ6PEV8 388 aaPredicted RBP16.55■□□□□ 0.24
SCAF1-204ENST00000601038 SNX20Q7Z614 316 aa16.55■□□□□ 0.24
SCAF1-204ENST00000601038 TMTC1Q8IUR5 882 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms