RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TEKT5Q96M29 485 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 AGAP3Q96P47 875 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 NRTNQ99748 197 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 ZNF552Q9H707 407 aaPredicted RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 KIR3DX1Q9H7L2 352 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 ZBTB20Q9HC78 741 aaPredicted RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 SLAMF7Q9NQ25 335 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 RYDENQ9NUL5 291 aaKnown RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 C5AR2Q9P296 337 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 SLC24A2Q9UI40 661 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 SLC5A6Q9Y289 635 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 GTF3C3Q9Y5Q9 886 aa5.95□□□□□ -1.46
VRK3-220ENST00000600259 CFAP20Q9Y6A4 193 aaKnown RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 BZW2Q9Y6E2 419 aaKnown RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 SETD2Q9BYW2 2564 aaPredicted RBP5.95□□□□□ -1.46
VRK3-220ENST00000600259 ZNF106Q9H2Y7 1883 aaKnown RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 A0A1W2PQJ5 194 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 UBA6A0AVT1 1052 aaPredicted RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 SLC9B1P1A6NJY1 282 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 AGAP14A8MT82 685 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 MASP2O00187 686 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 BTN3A3O00478 584 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 HCRTR1O43613 425 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 CNOT3O75175 753 aaKnown RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 PMPCBO75439 489 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 SERPING1P05155 500 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 KLK3P07288 261 aaPredicted RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 PRF1P14222 555 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 ST6GAL1P15907 406 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 VCLP18206 1134 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 POLR2CP19387 275 aaPredicted RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 PTPN3P26045 913 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 TNFRSF8P28908 595 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 PRDX3P30048 256 aaKnown RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 HNRNPH3P31942 346 aaKnown RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 SSR1P43307 286 aaKnown RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 CHRNA4P43681 627 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 GABRA4P48169 554 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 ARCN1P48444 511 aaKnown RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 WNT3AP56704 352 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 TYRO3Q06418 890 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 WASHC5Q12768 1159 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 MSLNQ13421 630 aaPredicted RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 ATP1A4Q13733 1029 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 PTPRCAPQ14761 206 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 IQCB1Q15051 598 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 PLCL1Q15111 1095 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 PCSK7Q16549 785 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 TAZQ16635 292 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 PTCHD3Q3KNS1 767 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 ZNF658BQ4V348 819 aaPredicted RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 ZRANB3Q5FWF4 1079 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 SIRPB2Q5JXA9 342 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 DNTTIP2Q5QJE6 756 aaKnown RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 LDLRAP1Q5SW96 308 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 GPRC6AQ5T6X5 926 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 Q6ZS92 163 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 VSIG1Q86XK7 387 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 TMEM126BQ8IUX1 230 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 SYTL1Q8IYJ3 562 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 BEND7Q8N7W2 519 aaPredicted RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 OR2L2Q8NH16 312 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 NAT14Q8WUY8 206 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 CPT1BQ92523 772 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 OXNAD1Q96HP4 312 aaPredicted RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 MRGPRX2Q96LB1 330 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 LINC00615Q96LM1 132 aaPredicted RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 TRAPPC9Q96Q05 1148 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 SRPK1Q96SB4 655 aaKnown RBP5.94□□□□□ -1.46
VRK3-220ENST00000600259 BPIFA3Q9BQP9 254 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 TLR10Q9BXR5 811 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 PITPNM3Q9BZ71 974 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 SLC29A3Q9BZD2 475 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 WWP1Q9H0M0 922 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 TRABDQ9H4I3 376 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 CBX8Q9HC52 389 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 SYTL2Q9HCH5 934 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 C1GALT1Q9NS00 363 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 HAUS2Q9NVX0 235 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 SMOXQ9NWM0 555 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 GPR83Q9NYM4 423 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 UBP1Q9NZI7 540 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 POMT2Q9UKY4 750 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 ACSL5Q9ULC5 683 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 SNX7Q9UNH6 387 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 HEY1Q9Y5J3 304 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 HIVEP1P15822 2718 aa5.94□□□□□ -1.46
VRK3-220ENST00000600259 TACC2O95359 2948 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 ANKUB1A6NFN9 424 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 OR2AG2A6NM03 316 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 BUD23O43709 281 aaKnown RBP5.93□□□□□ -1.46
VRK3-220ENST00000600259 SLC4A1P02730 911 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 CTSBP07858 339 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 CBSLP0DN79 551 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 CBSP35520 551 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 GJC1P36383 396 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 SPAM1P38567 509 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 HADHAP40939 763 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 ARL4DP49703 201 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 ZBED6P86452 979 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms