RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	C11orf96	Q7Z7L8	435 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	SDR16C5	Q8N3Y7	309 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	BEND7	Q8N7W2	519 aa	Predicted RBP	21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	OR4C6	Q8NH72	309 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	MTBP	Q96DY7	904 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	PANX3	Q96QZ0	392 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	GPR22	Q99680	433 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	TIMM29	Q9BSF4	260 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	SLC23A2	Q9UGH3	650 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	TBK1	Q9UHD2	729 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	KCNK6	Q9Y257	313 aa		21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	MTO1	Q9Y2Z2	717 aa	Known RBP	21.57	■■□□□ 1.04
LTBP4-227	ENST00000600026	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026		E5RI56	91 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	ATP8B1	O43520	1251 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	VPS26A	O75436	327 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	FTH1	P02794	183 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	ALPPL2	P10696	532 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	PBLD	P30039	288 aa	Predicted RBP	21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	ACTR1B	P42025	376 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	PRLHR	P49683	370 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	ACTR1A	P61163	376 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	POU4F1	Q01851	419 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	CTSL3P	Q5NE16	218 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	RBM20	Q5T481	1227 aa	Known RBP	21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	HECTD2	Q5U5R9	776 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	ZNF549	Q6P9A3	640 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	SLC30A9	Q6PML9	568 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	PIP4P1	Q86T03	277 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	TSPAN17	Q96FV3	270 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	CAMK1G	Q96NX5	476 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	NDN	Q99608	321 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	PCOLCE2	Q9UKZ9	415 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	SLC39A10	Q9ULF5	831 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	VWA7	Q9Y334	891 aa		21.56	■■□□□ 1.04
LTBP4-227	ENST00000600026	TRIM49D1	C9J1S8	452 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	MAP2K7	O14733	419 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	TPP1	O14773	563 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	POP7	O75817	140 aa	Known RBP	21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	CHRM3	P20309	590 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	SAT1	P21673	171 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	DNAJC3	Q13217	504 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	BMPR2	Q13873	1038 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	USP10	Q14694	798 aa	Known RBP	21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	UGT3A1	Q6NUS8	523 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	LVRN	Q6Q4G3	990 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	BAHD1	Q8TBE0	780 aa	Predicted RBP	21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	RHBDD1	Q8TEB9	315 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	PKNOX2	Q96KN3	472 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	LINC00615	Q96LM1	132 aa	Predicted RBP	21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	DUSP23	Q9BVJ7	150 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	KLC4	Q9NSK0	619 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	TAS2R13	Q9NYV9	303 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	TAAR2	Q9P1P5	351 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	CTNNAL1	Q9UBT7	734 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	LGALS13	Q9UHV8	139 aa		21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	21.55	■■□□□ 1.04
LTBP4-227	ENST00000600026	TM4SF5	O14894	197 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	RGS16	O15492	202 aa	Predicted RBP	21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	SIGLEC6	O43699	453 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	CBFA2T3	O75081	653 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	TRIM16	O95361	564 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	GSTM1	P09488	218 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	MYZAP	P0CAP1	466 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	KRT15	P19012	456 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	GSTM4	Q03013	218 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	C6orf132	Q5T0Z8	1188 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	DGLUCY	Q7Z3D6	616 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	FAM46D	Q8NEK8	389 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	KCNJ9	Q92806	393 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	CENPH	Q9H3R5	247 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	SPATS2L	Q9NUQ6	558 aa	Known RBP	21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	ZNF446	Q9NWS9	450 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	EURL	Q9NYK6	297 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026	DNAJC16	Q9Y2G8	782 aa		21.54	■■□□□ 1.04
LTBP4-227	ENST00000600026		B4DGG1	531 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	KPNA5	O15131	536 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	OPA1	O60313	960 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	NIPSNAP2	O75323	286 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	CD9	P21926	228 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	ATP5D	P30049	168 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	SKIV2L2	P42285	1042 aa	Known RBP	21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	SERPINB8	P50452	374 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	CLCNKA	P51800	687 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	DMPK	Q09013	629 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	ZCCHC8	Q6NZY4	707 aa	Known RBP	21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	AMZ2	Q86W34	360 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	GOLGA6L1	Q8N7Z2	621 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	DEFB124	Q8NES8	71 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	CCM2	Q9BSQ5	444 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	STMN4	Q9H169	189 aa	Predicted RBP	21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	OSGEPL1	Q9H4B0	414 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	SIRPG	Q9P1W8	387 aa		21.53	■■□□□ 1.04
LTBP4-227	ENST00000600026	KLHL33	A6NCF5	533 aa		21.52	■■□□□ 1.04
LTBP4-227	ENST00000600026	MGAT4D	A6NG13	374 aa		21.52	■■□□□ 1.04
LTBP4-227	ENST00000600026	PRR19	A6NJB7	356 aa		21.52	■■□□□ 1.04
LTBP4-227	ENST00000600026	STMN1	P16949	149 aa		21.52	■■□□□ 1.04
LTBP4-227	ENST00000600026	VCL	P18206	1134 aa		21.52	■■□□□ 1.04
LTBP4-227	ENST00000600026	ITGB6	P18564	788 aa		21.52	■■□□□ 1.04
LTBP4-227	ENST00000600026	SDHB	P21912	280 aa		21.52	■■□□□ 1.04

Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms