RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, human

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-206	ENST00000599699	PTK6	Q13882	451 aa		27.57	■■■□□ 2
SSBP4-206	ENST00000599699	SEMA3A	Q14563	771 aa		27.57	■■■□□ 2
SSBP4-206	ENST00000599699	IGF2-AS	Q6U949	168 aa		27.57	■■■□□ 2
SSBP4-206	ENST00000599699	LDB1	Q86U70	411 aa	Predicted RBP	27.57	■■■□□ 2
SSBP4-206	ENST00000599699	MPP5	Q8N3R9	675 aa		27.57	■■■□□ 2
SSBP4-206	ENST00000599699	RUNDC3B	Q96NL0	473 aa		27.57	■■■□□ 2
SSBP4-206	ENST00000599699	SERPINB12	Q96P63	405 aa		27.57	■■■□□ 2
SSBP4-206	ENST00000599699	MARCH4	Q9P2E8	410 aa	Predicted RBP	27.57	■■■□□ 2
SSBP4-206	ENST00000599699	KLHL3	Q9UH77	587 aa		27.57	■■■□□ 2
SSBP4-206	ENST00000599699	KIF26B	Q2KJY2	2108 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	SDR42E2	A6NKP2	422 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699		A8MU76	341 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	HGS	O14964	777 aa	Predicted RBP	27.56	■■■□□ 2
SSBP4-206	ENST00000599699	FANCG	O15287	622 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	VAPB	O95292	243 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	ITGA2B	P08514	1039 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	GSTM1	P09488	218 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	CSTF2	P33240	577 aa	Known RBP eCLIP	27.56	■■■□□ 2
SSBP4-206	ENST00000599699	GSTM4	Q03013	218 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	PLCL1	Q15111	1095 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	DUS1L	Q6P1R4	473 aa	Known RBP	27.56	■■■□□ 2
SSBP4-206	ENST00000599699	PLXDC1	Q8IUK5	500 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	NAT8L	Q8N9F0	302 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	SNIP1	Q8TAD8	396 aa	Known RBP	27.56	■■■□□ 2
SSBP4-206	ENST00000599699	JPH3	Q8WXH2	748 aa	Predicted RBP	27.56	■■■□□ 2
SSBP4-206	ENST00000599699	ELMO1	Q92556	727 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	SLCO2A1	Q92959	643 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	RMDN2	Q96LZ7	410 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	RNF14	Q9UBS8	474 aa		27.56	■■■□□ 2
SSBP4-206	ENST00000599699	RRP8	O43159	456 aa	Known RBP	27.55	■■■□□ 2
SSBP4-206	ENST00000599699	PAM	P19021	973 aa		27.55	■■■□□ 2
SSBP4-206	ENST00000599699	ITIH1	P19827	911 aa		27.55	■■■□□ 2
SSBP4-206	ENST00000599699	MLLT3	P42568	568 aa	Predicted RBP	27.55	■■■□□ 2
SSBP4-206	ENST00000599699	PTGIR	P43119	386 aa		27.55	■■■□□ 2
SSBP4-206	ENST00000599699	PREP	P48147	710 aa		27.55	■■■□□ 2
SSBP4-206	ENST00000599699	TTPA	P49638	278 aa		27.55	■■■□□ 2
SSBP4-206	ENST00000599699	MAPK10	P53779	464 aa		27.55	■■■□□ 2
SSBP4-206	ENST00000599699	PCBP4	P57723	403 aa	Known RBP	27.55	■■■□□ 2
SSBP4-206	ENST00000599699	DR1	Q01658	176 aa		27.55	■■■□□ 2
SSBP4-206	ENST00000599699	XKR5	Q6UX68	686 aa		27.55	■■■□□ 2
SSBP4-206	ENST00000599699	AGBL5	Q8NDL9	886 aa		27.55	■■■□□ 2
SSBP4-206	ENST00000599699	OGFR	Q9NZT2	677 aa		27.55	■■■□□ 2
SSBP4-206	ENST00000599699	MAGEB16	A2A368	324 aa		27.54	■■■□□ 2
SSBP4-206	ENST00000599699	CCDC188	H7C350	402 aa		27.54	■■■□□ 2
SSBP4-206	ENST00000599699	IFRD1	O00458	451 aa	Predicted RBP	27.54	■■■□□ 2
SSBP4-206	ENST00000599699	BRD3	Q15059	726 aa		27.54	■■■□□ 2
SSBP4-206	ENST00000599699	SYTL3	Q4VX76	610 aa		27.54	■■■□□ 2
SSBP4-206	ENST00000599699	RNASEH2B	Q5TBB1	312 aa	Known RBP	27.54	■■■□□ 2
SSBP4-206	ENST00000599699	ARMC3	Q5W041	872 aa		27.54	■■■□□ 2
SSBP4-206	ENST00000599699	CAPRIN2	Q6IMN6	1127 aa	Known RBP	27.54	■■■□□ 2
SSBP4-206	ENST00000599699	LRRC69	Q6ZNQ3	347 aa		27.54	■■■□□ 2
SSBP4-206	ENST00000599699	HEBP2	Q9Y5Z4	205 aa		27.54	■■■□□ 2
SSBP4-206	ENST00000599699	MAD1L1	Q9Y6D9	718 aa		27.54	■■■□□ 2
SSBP4-206	ENST00000599699	COLEC10	Q9Y6Z7	277 aa		27.54	■■■□□ 2
SSBP4-206	ENST00000599699	ZZEF1	O43149	2961 aa		27.53	■■■□□ 2
SSBP4-206	ENST00000599699	DNALI1	O14645	258 aa	Predicted RBP	27.53	■■■□□ 2
SSBP4-206	ENST00000599699	NDUFS3	O75489	264 aa		27.53	■■■□□ 2
SSBP4-206	ENST00000599699	EIF2S3	P41091	472 aa	Known RBP	27.53	■■■□□ 2
SSBP4-206	ENST00000599699	ETF1	P62495	437 aa	Known RBP	27.53	■■■□□ 2
SSBP4-206	ENST00000599699	RPA4	Q13156	261 aa		27.53	■■■□□ 2
SSBP4-206	ENST00000599699	BOP1	Q14137	746 aa	Known RBP	27.53	■■■□□ 2
SSBP4-206	ENST00000599699	MRNIP	Q6NTE8	343 aa		27.53	■■■□□ 2
SSBP4-206	ENST00000599699	SYT10	Q6XYQ8	523 aa		27.53	■■■□□ 2
SSBP4-206	ENST00000599699	SYDE1	Q6ZW31	735 aa	Predicted RBP	27.53	■■■□□ 2
SSBP4-206	ENST00000599699	PCGF5	Q86SE9	256 aa		27.53	■■■□□ 2
SSBP4-206	ENST00000599699	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	27.53	■■■□□ 2
SSBP4-206	ENST00000599699	NAF1	Q96HR8	494 aa	Known RBP	27.53	■■■□□ 2
SSBP4-206	ENST00000599699	TGM7	Q96PF1	710 aa		27.53	■■■□□ 2
SSBP4-206	ENST00000599699	TSSK1B	Q9BXA7	367 aa		27.53	■■■□□ 2
SSBP4-206	ENST00000599699	OR52A5	Q9H2C5	316 aa		27.53	■■■□□ 2
SSBP4-206	ENST00000599699	PDP2	Q9P2J9	529 aa		27.53	■■■□□ 2
SSBP4-206	ENST00000599699	URB1	O60287	2271 aa	Known RBP	27.53	■■■□□ 2
SSBP4-206	ENST00000599699	CACNA1B	Q00975	2339 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	CDRT15L2	A8MXV6	281 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	GOLGA8K	D6RF30	607 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	GOLGA8T	H3BQL2	631 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	LIN7A	O14910	233 aa	Predicted RBP	27.52	■■■□□ 2
SSBP4-206	ENST00000599699	CCL4	P13236	92 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	ITGB6	P18564	788 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	PDHA2	P29803	388 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	ETV5	P41161	510 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	CAPZB	P47756	277 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	GFER	P55789	205 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	ZNF658B	Q4V348	819 aa	Predicted RBP	27.52	■■■□□ 2
SSBP4-206	ENST00000599699	IZUMO3	Q5VZ72	239 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	KIAA0930	Q6ICG6	404 aa	Predicted RBP	27.52	■■■□□ 2
SSBP4-206	ENST00000599699	KLHL35	Q6PF15	583 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	FAM129C	Q86XR2	697 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	ZNF248	Q8NDW4	579 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	RSC1A1	Q92681	617 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	ZNF669	Q96BR6	464 aa	Predicted RBP	27.52	■■■□□ 2
SSBP4-206	ENST00000599699	FERD3L	Q96RJ6	166 aa		27.52	■■■□□ 2
SSBP4-206	ENST00000599699	TRIM56	Q9BRZ2	755 aa	Known RBP	27.52	■■■□□ 2
SSBP4-206	ENST00000599699	FAM237B	A0A1B0GVD1	139 aa		27.51	■■□□□ 1.99
SSBP4-206	ENST00000599699	PRMT5	O14744	637 aa	Predicted RBP	27.51	■■□□□ 1.99
SSBP4-206	ENST00000599699	CAPN5	O15484	640 aa	Predicted RBP	27.51	■■□□□ 1.99
SSBP4-206	ENST00000599699	ARNT	P27540	789 aa		27.51	■■□□□ 1.99
SSBP4-206	ENST00000599699	NDUFS1	P28331	727 aa		27.51	■■□□□ 1.99
SSBP4-206	ENST00000599699	SLC5A2	P31639	672 aa		27.51	■■□□□ 1.99
SSBP4-206	ENST00000599699	DHX34	Q14147	1143 aa	Known RBP	27.51	■■□□□ 1.99

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