RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ELMO1Q92556 727 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 CCDC97Q96F63 343 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 CAMK1GQ96NX5 476 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 CYTH2Q99418 400 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 ANKZF1Q9H8Y5 726 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 FBXO6Q9NRD1 293 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 CRYL1Q9Y2S2 319 aa16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 ASCC3Q8N3C0 2202 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-219ENST00000599575 PLXNB3Q9ULL4 1909 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 LY6G6EA0A0G2JKS1 128 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 SLC5A10A0PJK1 596 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 E5RI56 91 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 SNX2O60749 519 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 GPC4O75487 556 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 HAUS5O94927 633 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 SLCO2B1O94956 709 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 TRIM16O95361 564 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 CHRM3P20309 590 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 MAPK9P45984 424 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 ID4P47928 161 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 CSE1LP55060 971 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 KYNUQ16719 465 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 CTSL3PQ5NE16 218 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 CAPRIN2Q6IMN6 1127 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 LRRC8EQ6NSJ5 796 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 CCNI2Q6ZMN8 369 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 KYQ8NBH2 561 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 CPNE1Q99829 537 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 CDC42EP4Q9H3Q1 356 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 EPB41L1Q9H4G0 881 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 PRDM8Q9NQV8 689 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 NINJ2Q9NZG7 142 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 COLEC10Q9Y6Z7 277 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 U3KQA8 63 aa16.22■□□□□ 0.19
SHKBP1-219ENST00000599575 VPS26AO75436 327 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 DKK1O94907 266 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 ABHD2P08910 425 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 BRAFP15056 766 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 RPL10P27635 214 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 PBLDP30039 288 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 CCR7P32248 378 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 ACADVLP49748 655 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 UBE2IP63279 158 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 MPP1Q00013 466 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 TCEA2Q15560 299 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 FAM83HQ6ZRV2 1179 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 STRA8Q7Z7C7 330 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 PDZD3Q86UT5 571 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 SLC22A15Q8IZD6 547 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 SLC37A2Q8TED4 501 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 CXorf40BQ96DE9 158 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 AARSD1Q9BTE6 412 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 OR52A5Q9H2C5 316 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 RHOJQ9H4E5 214 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 ACSS3Q9H6R3 686 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 CAAP1Q9H8G2 361 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 TAS2R13Q9NYV9 303 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 SIRPGQ9P1W8 387 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 LRIT1Q9P2V4 623 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 CPNE7Q9UBL6 633 aa16.21■□□□□ 0.19
SHKBP1-219ENST00000599575 RHPN2P1A8MT19 583 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 KDM1AO60341 852 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 RFPL3O75679 317 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 VIPP01282 170 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 C1QAP02745 245 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 RPN2P04844 631 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 CBSLP0DN79 551 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 ENO3P13929 434 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 GABRB3P28472 473 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 CBSP35520 551 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 GP5P40197 560 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 EPHA4P54764 986 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 SIM1P81133 766 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 HHEXQ03014 270 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 HSPA14Q0VDF9 509 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 BOP1Q14137 746 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 RPE65Q16518 533 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 KBTBD12Q3ZCT8 623 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 ZNF789Q5FWF6 425 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 GRTP1Q5TC63 336 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 FAM45BPQ6NSW5 357 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 CNSTQ6PJW8 725 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 XKR5Q6UX68 686 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 MICALCLQ6ZW33 695 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 NEK10Q6ZWH5 1172 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 ZC3HC1Q86WB0 502 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 TRIM48Q8IWZ4 208 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 PNPLA1Q8N8W4 532 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 FAM45AQ8TCE6 357 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 FBF1Q8TES7 1133 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 MCMBPQ9BTE3 642 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 MVB12BQ9H7P6 319 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 SLC40A1Q9NP59 571 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 DHRS7Q9Y394 339 aa16.2■□□□□ 0.18
SHKBP1-219ENST00000599575 A0A087WUV0 522 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 CPED1A4D0V7 1026 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 LILRA5A6NI73 299 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 EML2O95834 649 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 MTHFD1P11586 935 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms