RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 AAR2Q9Y312 384 aaKnown RBP18.33■□□□□ 0.52
PNKP-213ENST00000599543 KIAA0754O94854 1291 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 FGF5P12034 268 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 NELFEP18615 380 aaKnown RBP18.32■□□□□ 0.52
PNKP-213ENST00000599543 CA5AP35218 305 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 DLSTP36957 453 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 PRPSAP1Q14558 356 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 PTPRCAPQ14761 206 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 TAF1AQ15573 450 aaPredicted RBP18.32■□□□□ 0.52
PNKP-213ENST00000599543 DEFB109BQ30KR1 87 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 CRTC2Q53ET0 693 aaPredicted RBP18.32■□□□□ 0.52
PNKP-213ENST00000599543 BEND7Q8N7W2 519 aaPredicted RBP18.32■□□□□ 0.52
PNKP-213ENST00000599543 OR4K2Q8NGD2 314 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 CCDC110Q8TBZ0 833 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 ZNF398Q8TD17 642 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 APOBEC4Q8WW27 367 aaKnown RBP18.32■□□□□ 0.52
PNKP-213ENST00000599543 UBXN4Q92575 508 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 GORASP1Q9BQQ3 440 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 PDE7BQ9NP56 450 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 CROTQ9UKG9 612 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 PCDHB3Q9Y5E6 796 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 MRPS18BQ9Y676 258 aaKnown RBP18.32■□□□□ 0.52
PNKP-213ENST00000599543 NBASA2RRP1 2371 aa18.32■□□□□ 0.52
PNKP-213ENST00000599543 KLHL33A6NCF5 533 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 C5orf60A6NFR6 353 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 KIF5CO60282 957 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 SRP72O76094 671 aaKnown RBP18.31■□□□□ 0.52
PNKP-213ENST00000599543 MTHFD1P11586 935 aaKnown RBP18.31■□□□□ 0.52
PNKP-213ENST00000599543 PSMB4P28070 264 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 PPP1CAP62136 330 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 TUBB3Q13509 450 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 SEPT6Q14141 434 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.31■□□□□ 0.52
PNKP-213ENST00000599543 DNTTIP2Q5QJE6 756 aaKnown RBP18.31■□□□□ 0.52
PNKP-213ENST00000599543 ANKRD20A2Q5SQ80 823 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 ATP1A1-AS1Q5TC04 95 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 ANKRD20A1Q5TYW2 823 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 ANKRD20A3Q5VUR7 823 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 METRNLQ641Q3 311 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 PTRH1Q86Y79 214 aaKnown RBP18.31■□□□□ 0.52
PNKP-213ENST00000599543 FAM71DQ8N9W8 422 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 C9orf43Q8TAL5 461 aaPredicted RBP18.31■□□□□ 0.52
PNKP-213ENST00000599543 MS4A14Q96JA4 679 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 APOL2Q9BQE5 337 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 TMEM121Q9BTD3 319 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 ASB8Q9H765 288 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 FAM8A1Q9UBU6 413 aa18.31■□□□□ 0.52
PNKP-213ENST00000599543 CFAP20Q9Y6A4 193 aaKnown RBP18.31■□□□□ 0.52
PNKP-213ENST00000599543 SPENQ96T58 3664 aaKnown RBP18.3■□□□□ 0.52
PNKP-213ENST00000599543 PTPN13Q12923 2485 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 MGAT4DA6NG13 374 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 SPAG6O75602 509 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 CRTAMO95727 393 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 FGGP02679 453 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 CCNYL3P0C7X3 344 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 ADRA1AP35348 466 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 ARL4DP49703 201 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 GDF10P55107 478 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 PDE1BQ01064 536 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 OLIG2Q13516 323 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 SIX1Q15475 284 aaPredicted RBP18.3■□□□□ 0.52
PNKP-213ENST00000599543 RANBP10Q6VN20 620 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 PRUNE1Q86TP1 453 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 SIDT2Q8NBJ9 832 aaKnown RBP18.3■□□□□ 0.52
PNKP-213ENST00000599543 TTC13Q8NBP0 860 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 SLC35B2Q8TB61 432 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 LRRC45Q96CN5 670 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 DCUN1D1Q96GG9 259 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 C12orf66Q96MD2 445 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 PPP1R2P1Q96PQ5 205 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 WWP1Q9H0M0 922 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 FKBPLQ9UIM3 349 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 CRLS1Q9UJA2 301 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 KCND3Q9UK17 655 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 RARRES3Q9UL19 164 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 ACSL5Q9ULC5 683 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 JRKLQ9Y4A0 524 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 KCTD3Q9Y597 815 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 PIKFYVEQ9Y2I7 2098 aa18.3■□□□□ 0.52
PNKP-213ENST00000599543 RELNP78509 3460 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 IGHV5-51A0A0C4DH38 117 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 LIASO43766 372 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 MT-ND3P03897 115 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 SLC35G4P0C7Q5 338 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 RALBP11234 206 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 F8A1P23610 371 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 TLE1Q04724 770 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 OOSP2Q86WS3 158 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 OR2L2Q8NH16 312 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 SLC41A2Q96JW4 573 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 SPATA13Q96N96 652 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 CD180Q99467 661 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 ZNF71Q9NQZ8 489 aaPredicted RBP18.29■□□□□ 0.52
PNKP-213ENST00000599543 SEMA5BQ9P283 1151 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 FLNCQ14315 2725 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 COL12A1Q99715 3063 aa18.29■□□□□ 0.52
PNKP-213ENST00000599543 UBA6A0AVT1 1052 aaPredicted RBP18.28■□□□□ 0.52
PNKP-213ENST00000599543 OR5K3A6NET4 321 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 TLCD2A6NGC4 264 aa18.28■□□□□ 0.52
PNKP-213ENST00000599543 KATNA1O75449 491 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms