RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 DUSP15Q9H1R2 295 aaPredicted RBP15.17■□□□□ 0.02
UPF1-206ENST00000598471 C12orf65Q9H3J6 166 aaKnown RBP15.17■□□□□ 0.02
UPF1-206ENST00000598471 ALG9Q9H6U8 611 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 FAM8A1Q9UBU6 413 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 EIF2B4Q9UI10 523 aaKnown RBP15.17■□□□□ 0.02
UPF1-206ENST00000598471 RNF112Q9ULX5 631 aa15.17■□□□□ 0.02
UPF1-206ENST00000598471 SLC5A10A0PJK1 596 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 PRSS38A1L453 326 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 NPEPPSL1A6NEC2 478 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 TK2O00142 265 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 KERAO60938 352 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 SMIM24O75264 130 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 GPC4O75487 556 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 THEGLP0DJG4 465 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 GNPDA1P46926 289 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 RACK1P63244 317 aaKnown RBP15.16■□□□□ 0.02
UPF1-206ENST00000598471 GUCY1A3Q02108 690 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 ASPHQ12797 758 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 OVGP1Q12889 678 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 RPA4Q13156 261 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 ZYG11AQ6WRX3 759 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 NAPRTQ6XQN6 538 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 FRA10AC1Q70Z53 315 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 PIWIL4Q7Z3Z4 852 aaKnown RBP15.16■□□□□ 0.02
UPF1-206ENST00000598471 ISCA2Q86U28 154 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 IQCHQ86VS3 1027 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 NUDCD3Q8IVD9 361 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 CFAP206Q8IYR0 622 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 RGL4Q8IZJ4 473 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 MFSD2AQ8NA29 543 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 OR13H1Q8NG92 308 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 GAB3Q8WWW8 586 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 PTERQ96BW5 349 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 CCDC126Q96EE4 140 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 SCARF2Q96GP6 870 aaPredicted RBP15.16■□□□□ 0.02
UPF1-206ENST00000598471 SLC6A18Q96N87 628 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 FOPNLQ96NB1 174 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 OR2M4Q96R27 311 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 CAPS2Q9BXY5 557 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 COG4Q9H9E3 785 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 CARS2Q9HA77 564 aaKnown RBP15.16■□□□□ 0.02
UPF1-206ENST00000598471 FGF22Q9HCT0 170 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 CPSF2Q9P2I0 782 aaKnown RBP15.16■□□□□ 0.02
UPF1-206ENST00000598471 COPG2Q9UBF2 871 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 TSR3Q9UJK0 312 aaKnown RBP15.16■□□□□ 0.02
UPF1-206ENST00000598471 TMCO1Q9UM00 188 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 SUFUQ9UMX1 484 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 GPSM3Q9Y4H4 160 aa15.16■□□□□ 0.02
UPF1-206ENST00000598471 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 H3BM21 787 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 SLCO2B1O94956 709 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 S100BP04271 92 aaPredicted RBP15.15■□□□□ 0.02
UPF1-206ENST00000598471 C8GP07360 202 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 BPGMP07738 259 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 TPBGLP0DKB5 382 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 ATP5F1P24539 256 aaPredicted RBP15.15■□□□□ 0.02
UPF1-206ENST00000598471 CD38P28907 300 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 PRKAA2P54646 552 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 DMPKQ09013 629 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 SP140Q13342 867 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 TSNQ15631 228 aaKnown RBP15.15■□□□□ 0.02
UPF1-206ENST00000598471 PYCR3Q53H96 274 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 C11orf96Q7Z7L8 435 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 SLC22A9Q8IVM8 553 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 TMEFF1Q8IYR6 380 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 SLC22A15Q8IZD6 547 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 MAML2Q8IZL2 1156 aaPredicted RBP15.15■□□□□ 0.02
UPF1-206ENST00000598471 PPP1R14CQ8TAE6 165 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 LRRC8CQ8TDW0 803 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 CKAP2Q8WWK9 683 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 SKA1Q96BD8 255 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 MAGEB18Q96M61 343 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 ORAI3Q9BRQ5 295 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 TRIM54Q9BYV2 358 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 MIR1-1HGQ9H1L0 117 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 CYP4F12Q9HCS2 524 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 ADAM21Q9UKJ8 722 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 PRKAB1Q9Y478 270 aa15.15■□□□□ 0.02
UPF1-206ENST00000598471 WDR91A4D1P6 747 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 SUPT3HB4E1H0 165 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 CDC7O00311 574 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 SLC16A5O15375 505 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 GALR2O43603 387 aaPredicted RBP15.14■□□□□ 0.01
UPF1-206ENST00000598471 H2AFYO75367 372 aaKnown RBP15.14■□□□□ 0.01
UPF1-206ENST00000598471 SUPT3HO75486 399 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 ENO2P09104 434 aaPredicted RBP15.14■□□□□ 0.01
UPF1-206ENST00000598471 ACP5P13686 325 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 CYP2A7P20853 494 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 CNR2P34972 360 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 SRP54P61011 504 aaKnown RBP15.14■□□□□ 0.01
UPF1-206ENST00000598471 GNGT1P63211 74 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 LRP8Q14114 963 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 PCLAFQ15004 111 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 OR4D1Q15615 310 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 PDK4Q16654 411 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 CHST15Q7LFX5 561 aaPredicted RBP15.14■□□□□ 0.01
UPF1-206ENST00000598471 RAB44Q7Z6P3 723 aaPredicted RBP15.14■□□□□ 0.01
UPF1-206ENST00000598471 GPSM1Q86YR5 675 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 PRSS33Q8NF86 280 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 RAB3IL1Q8TBN0 382 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms