RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 GAB3Q8WWW8 586 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 KIAA1191Q96A73 305 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 PDXPQ96GD0 296 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 MIR1-1HGQ9H1L0 117 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 GPR27Q9NS67 375 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 CPSF2Q9P2I0 782 aaKnown RBP14.38□□□□□ -0.11
VRK3-212ENST00000596814 GULP1Q9UBP9 304 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 KLQ9UEF7 1012 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 CDYLQ9Y232 598 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 KMT2EQ8IZD2 1858 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 KLHL33A6NCF5 533 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 TNFRSF10CO14798 259 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 SLCO2B1O94956 709 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 FUCA1P04066 466 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 MAOBP27338 520 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 GNPDA1P46926 289 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 PREPP48147 710 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 RACK1P63244 317 aaKnown RBP14.38□□□□□ -0.11
VRK3-212ENST00000596814 GUCY1A3Q02108 690 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 TSNQ15631 228 aaKnown RBP14.38□□□□□ -0.11
VRK3-212ENST00000596814 PYCR3Q53H96 274 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 NEK10Q6ZWH5 1172 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 ARMCX6Q7L4S7 300 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 VRK3Q8IV63 474 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 CFAP206Q8IYR0 622 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 RGL4Q8IZJ4 473 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 SLC22A18ASQ8N1D0 253 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 LILRA3Q8N6C8 439 aaPredicted RBP14.38□□□□□ -0.11
VRK3-212ENST00000596814 RHEBL1Q8TAI7 183 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 RDH11Q8TC12 318 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 SKA2Q8WVK7 121 aaPredicted RBP14.38□□□□□ -0.11
VRK3-212ENST00000596814 OR1E3Q8WZA6 343 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 KLHDC7BQ96G42 594 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 OR2M4Q96R27 311 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 TIMM29Q9BSF4 260 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 CARS2Q9HA77 564 aaKnown RBP14.38□□□□□ -0.11
VRK3-212ENST00000596814 CYP4F12Q9HCS2 524 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 TM7SF3Q9NS93 570 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 COPG2Q9UBF2 871 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 IKZF3Q9UKT9 509 aa14.38□□□□□ -0.11
VRK3-212ENST00000596814 CCDC189A1A4V9 331 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 CDC7O00311 574 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 KERAO60938 352 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 SBK3P0C264 359 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 MPC1LP0DKB6 136 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 MYL2P10916 166 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 ACP5P13686 325 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 VCLP18206 1134 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 CD38P28907 300 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 AVPR2P30518 371 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 PLOD1Q02809 727 aaPredicted RBP14.37□□□□□ -0.11
VRK3-212ENST00000596814 NFE2L1Q14494 772 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 PCLAFQ15004 111 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 OR4D1Q15615 310 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 WDR45BQ5MNZ6 344 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 CHST15Q7LFX5 561 aaPredicted RBP14.37□□□□□ -0.11
VRK3-212ENST00000596814 ADAMTSL2Q86TH1 951 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 SLC22A15Q8IZD6 547 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 TMEM151AQ8N4L1 468 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 MFSD2AQ8NA29 543 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 STAG3L4Q8TBR4 150 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 DNASE2BQ8WZ79 361 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 MECRQ9BV79 373 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 TM9SF3Q9HD45 589 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 SLC23A2Q9UGH3 650 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 RNF112Q9ULX5 631 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 DNAJC16Q9Y2G8 782 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 GPSM3Q9Y4H4 160 aa14.37□□□□□ -0.11
VRK3-212ENST00000596814 GON4LQ3T8J9 2241 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 WDR91A4D1P6 747 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 TARM1B6A8C7 271 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 CPA3P15088 417 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 SRP54P61011 504 aaKnown RBP14.36□□□□□ -0.11
VRK3-212ENST00000596814 DMPKQ09013 629 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 RPA4Q13156 261 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 SRSF5Q13243 272 aaKnown RBP14.36□□□□□ -0.11
VRK3-212ENST00000596814 ALG11Q2TAA5 492 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 TTC19Q6DKK2 380 aaPredicted RBP14.36□□□□□ -0.11
VRK3-212ENST00000596814 XKR5Q6UX68 686 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 ZYG11AQ6WRX3 759 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 CYHR1Q6ZMK1 362 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 IQCHQ86VS3 1027 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 DCP2Q8IU60 420 aaKnown RBP14.36□□□□□ -0.11
VRK3-212ENST00000596814 EXT2Q93063 718 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 TSACCQ96A04 125 aaPredicted RBP14.36□□□□□ -0.11
VRK3-212ENST00000596814 ATOH8Q96SQ7 321 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 SPAG17Q6Q759 2223 aa14.36□□□□□ -0.11
VRK3-212ENST00000596814 ZFC3H1O60293 1989 aaKnown RBP14.36□□□□□ -0.11
VRK3-212ENST00000596814 TNRC6BQ9UPQ9 1833 aaKnown RBP14.36□□□□□ -0.11
VRK3-212ENST00000596814 SPTY2D1-AS1A0A0U1RR47 76 aa14.35□□□□□ -0.11
VRK3-212ENST00000596814 A0A1W2PR77 199 aa14.35□□□□□ -0.11
VRK3-212ENST00000596814 G3V2L1 256 aa14.35□□□□□ -0.11
VRK3-212ENST00000596814 H3BM21 787 aa14.35□□□□□ -0.11
VRK3-212ENST00000596814 BIRC5O15392 142 aa14.35□□□□□ -0.11
VRK3-212ENST00000596814 KCNJ13O60928 360 aa14.35□□□□□ -0.11
VRK3-212ENST00000596814 WNT1P04628 370 aa14.35□□□□□ -0.11
VRK3-212ENST00000596814 BPGMP07738 259 aa14.35□□□□□ -0.11
VRK3-212ENST00000596814 NEFHP12036 1026 aa14.35□□□□□ -0.11
VRK3-212ENST00000596814 TAC1P20366 129 aa14.35□□□□□ -0.11
VRK3-212ENST00000596814 OVGP1Q12889 678 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms