RNA–Protein interactions for RNA: ENST00000596554.5

C19orf48-206, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 3

Gene C19orf48, Length 727 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-206ENST00000596554 CHST8Q9H2A9 424 aa12.67□□□□□ -0.38
C19orf48-206ENST00000596554 KIR3DX1Q9H7L2 352 aa12.67□□□□□ -0.38
C19orf48-206ENST00000596554 IMP3Q9NV31 184 aaKnown RBP12.67□□□□□ -0.38
C19orf48-206ENST00000596554 ACSL5Q9ULC5 683 aa12.67□□□□□ -0.38
C19orf48-206ENST00000596554 ZNF451Q9Y4E5 1061 aa12.67□□□□□ -0.38
C19orf48-206ENST00000596554 SNRNP200O75643 2136 aaKnown RBP12.67□□□□□ -0.38
C19orf48-206ENST00000596554 MDC1Q14676 2089 aaKnown RBP12.66□□□□□ -0.38
C19orf48-206ENST00000596554 PCSK5Q92824 1860 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 SSU72P8A0A1W2PR75 194 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 SEMA7AO75326 666 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 KLK3P07288 261 aaPredicted RBP12.66□□□□□ -0.38
C19orf48-206ENST00000596554 MSL3P1P0C860 447 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 NFKB1P19838 968 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 HLA-DPA1P20036 260 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 RORAP35398 523 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 CDKN2BP42772 138 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 CCL11P51671 97 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 KPNA2P52292 529 aaKnown RBP12.66□□□□□ -0.38
C19orf48-206ENST00000596554 SLC1A5Q15758 541 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 LONRF2Q1L5Z9 754 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 PLEKHS1Q5SXH7 462 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 FNBP1LQ5T0N5 605 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 TMTC4Q5T4D3 741 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 HIST2H2BCQ6DN03 193 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 DUS1LQ6P1R4 473 aaKnown RBP12.66□□□□□ -0.38
C19orf48-206ENST00000596554 MFSD7Q6UXD7 560 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 DSELQ8IZU8 1212 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 Q8NA96 180 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 OR2L2Q8NH16 312 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 BLOC1S5Q8TDH9 187 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 TFB1MQ8WVM0 346 aaKnown RBP12.66□□□□□ -0.38
C19orf48-206ENST00000596554 CPT1BQ92523 772 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 RNF25Q96BH1 459 aaPredicted RBP12.66□□□□□ -0.38
C19orf48-206ENST00000596554 LINC00615Q96LM1 132 aaPredicted RBP12.66□□□□□ -0.38
C19orf48-206ENST00000596554 FCRL5Q96RD9 977 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 DNAJC7Q99615 494 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 NLNQ9BYT8 704 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 WWP1Q9H0M0 922 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 DDX56Q9NY93 547 aaKnown RBP12.66□□□□□ -0.38
C19orf48-206ENST00000596554 SAE1Q9UBE0 346 aaPredicted RBP12.66□□□□□ -0.38
C19orf48-206ENST00000596554 POMT2Q9UKY4 750 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 CFAP20Q9Y6A4 193 aaKnown RBP12.66□□□□□ -0.38
C19orf48-206ENST00000596554 PCM1Q15154 2024 aa12.66□□□□□ -0.38
C19orf48-206ENST00000596554 SVILO95425 2214 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 OR6C74A6NCV1 312 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 MEN1O00255 615 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 SGTAO43765 313 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 DPM1O60762 260 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 CAPN1P07384 714 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 RNF224P0DH78 156 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 PYGMP11217 842 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 PECAM1P16284 738 aaPredicted RBP12.65□□□□□ -0.38
C19orf48-206ENST00000596554 SLC1A1P43005 524 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 ABRQ12979 859 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 MPP3Q13368 585 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 TFDP2Q14188 446 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 INPP5JQ15735 1006 aaPredicted RBP12.65□□□□□ -0.38
C19orf48-206ENST00000596554 BCL7AQ4VC05 210 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 ZNF789Q5FWF6 425 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 LCN10Q6JVE6 187 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 JMJD6Q6NYC1 403 aaPredicted RBP12.65□□□□□ -0.38
C19orf48-206ENST00000596554 FAM198BQ6UWH4 519 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 GLT6D1Q7Z4J2 308 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 RHOT2Q8IXI1 618 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 RHOT1Q8IXI2 618 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 ZNF567Q8N184 647 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 SLC25A41Q8N5S1 370 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 ENDOVQ8N8Q3 282 aaKnown RBP12.65□□□□□ -0.38
C19orf48-206ENST00000596554 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
C19orf48-206ENST00000596554 RMDN2Q96LZ7 410 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 C12orf66Q96MD2 445 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 PPM1MQ96MI6 270 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 VAT1Q99536 393 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 SYTL2Q9HCH5 934 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 IFNKQ9P0W0 207 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 TCFL5Q9UL49 500 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 SNX7Q9UNH6 387 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 PKP3Q9Y446 797 aa12.65□□□□□ -0.38
C19orf48-206ENST00000596554 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.65□□□□□ -0.38not detected■■□□□ 14.2
C19orf48-206ENST00000596554 DOCK10Q96BY6 2186 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 MATN2O00339 956 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 BUD23O43709 281 aaKnown RBP12.64□□□□□ -0.39
C19orf48-206ENST00000596554 TMEM63AO94886 807 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 PRAMEF1O95521 474 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 SLC35G4P0C7Q5 338 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 MSH3P20585 1137 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 VARSP26640 1264 aaKnown RBP12.64□□□□□ -0.39
C19orf48-206ENST00000596554 NDUFS1P28331 727 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 PBLDP30039 288 aaPredicted RBP12.64□□□□□ -0.39
C19orf48-206ENST00000596554 AKT1P31749 480 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 TNNT3P45378 269 aaPredicted RBP12.64□□□□□ -0.39
C19orf48-206ENST00000596554 ITGA1P56199 1179 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 TCEAL1Q15170 157 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 PRR30Q53SZ7 412 aaPredicted RBP12.64□□□□□ -0.39
C19orf48-206ENST00000596554 PRAMEF17Q5VTA0 474 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 ARMC6Q6NXE6 501 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 MED25Q71SY5 747 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 TMEM102Q8N9M5 508 aaPredicted RBP12.64□□□□□ -0.39
C19orf48-206ENST00000596554 GLIS1Q8NBF1 620 aa12.64□□□□□ -0.39
C19orf48-206ENST00000596554 FDCSPQ8NFU4 85 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms