RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PADI4Q9UM07 663 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 KCNK6Q9Y257 313 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 MAGEB16A2A368 324 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 B4DGG1 531 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 SMAPO00193 183 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 GOT2P00505 430 aaKnown RBP19.29■□□□□ 0.68
LSM4-203ENST00000593829 PRSS56P0CW18 603 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 ZNF7P17097 686 aaPredicted RBP19.29■□□□□ 0.68
LSM4-203ENST00000593829 FOXN2P32314 431 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 CTSCP53634 463 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 ILKQ13418 452 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 MORF4L2Q15014 288 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 LONRF1Q17RB8 773 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 INSCQ1MX18 579 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 TMEM220Q6QAJ8 160 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 RIBC1Q8N443 379 aaPredicted RBP19.29■□□□□ 0.68
LSM4-203ENST00000593829 GPR156Q8NFN8 814 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 ZDHHC1Q8WTX9 485 aa19.29■□□□□ 0.68
LSM4-203ENST00000593829 PLXNB3Q9ULL4 1909 aa19.28■□□□□ 0.68
LSM4-203ENST00000593829 OR2AG2A6NM03 316 aa19.28■□□□□ 0.68
LSM4-203ENST00000593829 RFPL3O75679 317 aa19.28■□□□□ 0.68
LSM4-203ENST00000593829 DKK1O94907 266 aa19.28■□□□□ 0.68
LSM4-203ENST00000593829 TRIM16O95361 564 aa19.28■□□□□ 0.68
LSM4-203ENST00000593829 CLCNKAP51800 687 aa19.28■□□□□ 0.68
LSM4-203ENST00000593829 PLA2G4EQ3MJ16 856 aa19.28■□□□□ 0.68
LSM4-203ENST00000593829 CEP128Q6ZU80 1094 aa19.28■□□□□ 0.68
LSM4-203ENST00000593829 DET1Q7L5Y6 550 aa19.28■□□□□ 0.68
LSM4-203ENST00000593829 PNPLA1Q8N8W4 532 aa19.28■□□□□ 0.68
LSM4-203ENST00000593829 MFSD3Q96ES6 412 aa19.28■□□□□ 0.68
LSM4-203ENST00000593829 SGF29Q96ES7 293 aa19.28■□□□□ 0.68
LSM4-203ENST00000593829 SLC23A2Q9UGH3 650 aa19.28■□□□□ 0.68
LSM4-203ENST00000593829 IGLV3-16A0A075B6K0 115 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 CPED1A4D0V7 1026 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 EME2A4GXA9 379 aaPredicted RBP19.27■□□□□ 0.68
LSM4-203ENST00000593829 NOBOXO60393 691 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 ATP5HO75947 161 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 CDK4P11802 303 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 VCLP18206 1134 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 MSH2P43246 934 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 B4GALNT1Q00973 533 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 DBN1Q16643 649 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 FASTKD1Q53R41 847 aaKnown RBP19.27■□□□□ 0.68
LSM4-203ENST00000593829 FNBP1LQ5T0N5 605 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 LYPLAL1Q5VWZ2 237 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 C11orf96Q7Z7L8 435 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 BBOF1Q8ND07 529 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 TTC1Q99614 292 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 FOXP3Q9BZS1 431 aa19.27■□□□□ 0.68
LSM4-203ENST00000593829 DNMT3AQ9Y6K1 912 aaPredicted RBP19.27■□□□□ 0.68
LSM4-203ENST00000593829 NDC80O14777 642 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 POP7O75817 140 aaKnown RBP19.27■□□□□ 0.67
LSM4-203ENST00000593829 KRT16P08779 473 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 ATP1B2P14415 290 aaPredicted RBP19.27■□□□□ 0.67
LSM4-203ENST00000593829 ITGA8P53708 1063 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 C14orf28Q4W4Y0 310 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 GUSBP11Q6P575 273 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 CES3Q6UWW8 571 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 CERS6Q6ZMG9 384 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 CCDC25Q86WR0 208 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 FITM2Q8N6M3 262 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 OR6C4Q8NGE1 309 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 IFI44Q8TCB0 444 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 NAT6Q93015 286 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 SIGLEC10Q96LC7 697 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 RAB3IPQ96QF0 476 aaPredicted RBP19.27■□□□□ 0.67
LSM4-203ENST00000593829 ANAPC5Q9UJX4 755 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 DNAJC16Q9Y2G8 782 aa19.27■□□□□ 0.67
LSM4-203ENST00000593829 FAM237BA0A1B0GVD1 139 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 KCNJ13O60928 360 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 CDH16O75309 829 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 GP1BAP07359 652 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 RPSAP08865 295 aaKnown RBP19.26■□□□□ 0.67
LSM4-203ENST00000593829 ABHD2P08910 425 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 BRAFP15056 766 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 PAMP19021 973 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 PPARGP37231 505 aaPredicted RBP19.26■□□□□ 0.67
LSM4-203ENST00000593829 SLC18A1P54219 525 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 NAA25Q14CX7 972 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 EFL1Q7Z2Z2 1120 aaKnown RBP19.26■□□□□ 0.67
LSM4-203ENST00000593829 AMZ2Q86W34 360 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 SFTPA2Q8IWL1 248 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 ADAMTS14Q8WXS8 1223 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 CCDC97Q96F63 343 aaPredicted RBP19.26■□□□□ 0.67
LSM4-203ENST00000593829 OSGEPL1Q9H4B0 414 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 CATSPERZQ9NTU4 200 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 EURLQ9NYK6 297 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 KLHL14Q9P2G3 628 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 TBC1D29Q9UFV1 150 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 MAD1L1Q9Y6D9 718 aa19.26■□□□□ 0.67
LSM4-203ENST00000593829 VAPBO95292 243 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 ADRB1P08588 477 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 BCL7AQ4VC05 210 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 AARS2Q5JTZ9 985 aaKnown RBP19.25■□□□□ 0.67
LSM4-203ENST00000593829 SPDYAQ5MJ70 313 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 RGS9BPQ6ZS82 235 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 C17orf82Q86X59 251 aaPredicted RBP19.25■□□□□ 0.67
LSM4-203ENST00000593829 NAGSQ8N159 534 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 NINJ2Q9NZG7 142 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 L3MBTL1Q9Y468 752 aa19.25■□□□□ 0.67
LSM4-203ENST00000593829 CD3EAPO15446 510 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms