RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 UGT8Q16880 541 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 C4orf17Q53FE4 359 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 KAZNQ674X7 775 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 BZW1Q7L1Q6 419 aaKnown RBP14.4□□□□□ -0.1
PNKP-202ENST00000593706 GLT6D1Q7Z4J2 308 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 SYVN1Q86TM6 617 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 BPHLQ86WA6 291 aaPredicted RBP14.4□□□□□ -0.1
PNKP-202ENST00000593706 OOSP2Q86WS3 158 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 KMT5CQ86Y97 462 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 SLC25A41Q8N5S1 370 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 CPT1CQ8TCG5 803 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 BLOC1S5Q8TDH9 187 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 THAP4Q8WY91 577 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 MR1Q95460 341 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 CD180Q99467 661 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 SLC25A23Q9BV35 468 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 IL26Q9NPH9 171 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 ACSS2Q9NR19 701 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 FAM8A1Q9UBU6 413 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 FAM153AQ9UHL3 310 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 EFR3BQ9Y2G0 817 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.4□□□□□ -0.1
PNKP-202ENST00000593706 PKP3Q9Y446 797 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 CFAP20Q9Y6A4 193 aaKnown RBP14.4□□□□□ -0.1
PNKP-202ENST00000593706 CACNA1DQ01668 2161 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 ANKRD12Q6UB98 2062 aa14.4□□□□□ -0.1
PNKP-202ENST00000593706 OR5K3A6NET4 321 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 ARGFXA6NJG6 315 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 F5H423 210 aaPredicted RBP14.39□□□□□ -0.11
PNKP-202ENST00000593706 APOC4-APOC2K7ER74 178 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 IPO7O95373 1038 aaKnown RBP14.39□□□□□ -0.11
PNKP-202ENST00000593706 APOC2P02655 101 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 MTHFD1P11586 935 aaKnown RBP14.39□□□□□ -0.11
PNKP-202ENST00000593706 NFKB1P19838 968 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 CHRNA4P43681 627 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 CTSCP53634 463 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 WNT3AP56704 352 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 HSD11B2P80365 405 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 IL10RAQ13651 578 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 ITGA9Q13797 1035 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 NFE2L1Q14494 772 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 CHRNA6Q15825 494 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 SIRPB2Q5JXA9 342 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 ARMC6Q6NXE6 501 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 TMEM220Q6QAJ8 160 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 KDELC1Q6UW63 502 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 CERS6Q6ZMG9 384 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 FAM83HQ6ZRV2 1179 aaPredicted RBP14.39□□□□□ -0.11
PNKP-202ENST00000593706 RASGEF1AQ8N9B8 481 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 DDHD1Q8NEL9 900 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 P3H4Q92791 437 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 HAUS1Q96CS2 278 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 GORASP1Q9BQQ3 440 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 DESI2Q9BSY9 194 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 AKIRIN1Q9H9L7 192 aaPredicted RBP14.39□□□□□ -0.11
PNKP-202ENST00000593706 HRASLS2Q9NWW9 162 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.39□□□□□ -0.11
PNKP-202ENST00000593706 HACD3Q9P035 362 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 SEMA5BQ9P283 1151 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 KLHL8Q9P2G9 620 aaPredicted RBP14.39□□□□□ -0.11
PNKP-202ENST00000593706 PCM1Q15154 2024 aa14.39□□□□□ -0.11
PNKP-202ENST00000593706 CELSR2Q9HCU4 2923 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 CCDC66A2RUB6 948 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 HACD1B0YJ81 288 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 BUD23O43709 281 aaKnown RBP14.38□□□□□ -0.11
PNKP-202ENST00000593706 UGT1A9O60656 530 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 SLC35G4P0C7Q5 338 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 UGT1A6P19224 532 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 UGT1A1P22309 533 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 UGT1A4P22310 534 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 GNLYP22749 145 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 TUBB4BP68371 445 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 TUBB2AQ13885 445 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 GPR19Q15760 415 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 LONRF2Q1L5Z9 754 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 FNBP1LQ5T0N5 605 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 TMTC4Q5T4D3 741 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 GPRC6AQ5T6X5 926 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 FHL5Q5TD97 284 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 CAPRIN2Q6IMN6 1127 aaKnown RBP14.38□□□□□ -0.11
PNKP-202ENST00000593706 DUS1LQ6P1R4 473 aaKnown RBP14.38□□□□□ -0.11
PNKP-202ENST00000593706 DET1Q7L5Y6 550 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 ZC3H18Q86VM9 953 aaKnown RBP14.38□□□□□ -0.11
PNKP-202ENST00000593706 LURAP1LQ8IV03 231 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 CCDC50Q8IVM0 306 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 ZNF567Q8N184 647 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 GALNT11Q8NCW6 608 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 IPMKQ8NFU5 416 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 OXNAD1Q96HP4 312 aaPredicted RBP14.38□□□□□ -0.11
PNKP-202ENST00000593706 C12orf66Q96MD2 445 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 TUBB2BQ9BVA1 445 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 HEMGNQ9BXL5 484 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 FSD1LQ9BXM9 530 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 WWP1Q9H0M0 922 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 UGT1A7Q9HAW7 530 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 UGT1A10Q9HAW8 530 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 UGT1A8Q9HAW9 530 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 FANCEQ9HB96 536 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 IL17CQ9P0M4 197 aa14.38□□□□□ -0.11
PNKP-202ENST00000593706 G3BP2Q9UN86 482 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms