RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TOX3O15405 576 aaPredicted RBP12.92□□□□□ -0.34
H3F3B-213ENST00000593254 CAPN5O15484 640 aaPredicted RBP12.92□□□□□ -0.34
H3F3B-213ENST00000593254 PTMAP06454 111 aaKnown RBP12.92□□□□□ -0.34
H3F3B-213ENST00000593254 TYRP1P17643 537 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 AMD1P17707 334 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 MSH3P20585 1137 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 AKT1P31749 480 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 DEKP35659 375 aaKnown RBP12.92□□□□□ -0.34
H3F3B-213ENST00000593254 NFE2L1Q14494 772 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 PARP6Q2NL67 630 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 FNBP1LQ5T0N5 605 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 CEACAM20Q6UY09 585 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 FAM83HQ6ZRV2 1179 aaPredicted RBP12.92□□□□□ -0.34
H3F3B-213ENST00000593254 ARHGEF18Q6ZSZ5 1173 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 CACNA2D3Q8IZS8 1091 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 FAM71DQ8N9W8 422 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 OR13C4Q8NGS5 318 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 SLC35B2Q8TB61 432 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 LRRC45Q96CN5 670 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 ABHD17AQ96GS6 310 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 ASB8Q9H765 288 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 APMAPQ9HDC9 416 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 MED13Q9UHV7 2174 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 R3HDM2Q9Y2K5 976 aaKnown RBP12.92□□□□□ -0.34
H3F3B-213ENST00000593254 ESPL1Q14674 2120 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 FBN2P35556 2912 aa12.92□□□□□ -0.34
H3F3B-213ENST00000593254 SPTBP11277 2137 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 TCRBV7S2A1N4TA0A589 114 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 KLHL33A6NCF5 533 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 MGAT4DA6NG13 374 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 NKX2-8O15522 239 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 LDB2O43679 373 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 RAD1O60671 282 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 METTL18O95568 372 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 HADHAP40939 763 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 GDF10P55107 478 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 SPARCL1Q14515 664 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 RPE65Q16518 533 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 BCL7AQ4VC05 210 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 METRNLQ641Q3 311 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 DET1Q7L5Y6 550 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 PRSS42Q7Z5A4 293 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 RNF10Q8N5U6 811 aaKnown RBP12.91□□□□□ -0.34
H3F3B-213ENST00000593254 BEND7Q8N7W2 519 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-213ENST00000593254 GPR150Q8NGU9 434 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 LINC00615Q96LM1 132 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-213ENST00000593254 TGM7Q96PF1 710 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 CTRCQ99895 268 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 TMEM121Q9BTD3 319 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 RAB33BQ9H082 229 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 ZNF768Q9H5H4 540 aaKnown RBP12.91□□□□□ -0.34
H3F3B-213ENST00000593254 EPHA6Q9UF33 1036 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 PSMD13Q9UNM6 376 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 TMEM184BQ9Y519 407 aaPredicted RBP12.91□□□□□ -0.34
H3F3B-213ENST00000593254 SEC16AO15027 2179 aa12.91□□□□□ -0.34
H3F3B-213ENST00000593254 POLR1CO15160 346 aaPredicted RBP12.9□□□□□ -0.34
H3F3B-213ENST00000593254 SGTAO43765 313 aa12.9□□□□□ -0.34
H3F3B-213ENST00000593254 ITGALP20701 1170 aa12.9□□□□□ -0.34
H3F3B-213ENST00000593254 PBLDP30039 288 aaPredicted RBP12.9□□□□□ -0.34
H3F3B-213ENST00000593254 LEPRP48357 1165 aaKnown RBP12.9□□□□□ -0.34
H3F3B-213ENST00000593254 KLRB1Q12918 225 aa12.9□□□□□ -0.34
H3F3B-213ENST00000593254 P3H1Q32P28 736 aa12.9□□□□□ -0.34
H3F3B-213ENST00000593254 LACTB2Q53H82 288 aaPredicted RBP12.9□□□□□ -0.34
H3F3B-213ENST00000593254 SNX20Q7Z614 316 aa12.9□□□□□ -0.34
H3F3B-213ENST00000593254 NXPE1Q8N323 547 aa12.9□□□□□ -0.34
H3F3B-213ENST00000593254 OR2L2Q8NH16 312 aa12.9□□□□□ -0.34
H3F3B-213ENST00000593254 NAT14Q8WUY8 206 aa12.9□□□□□ -0.34
H3F3B-213ENST00000593254 ULK4Q96C45 1275 aa12.9□□□□□ -0.34
H3F3B-213ENST00000593254 LRRC40Q9H9A6 602 aa12.9□□□□□ -0.34
H3F3B-213ENST00000593254 CRLS1Q9UJA2 301 aa12.9□□□□□ -0.34
H3F3B-213ENST00000593254 ACSL5Q9ULC5 683 aa12.9□□□□□ -0.34
H3F3B-213ENST00000593254 TRBV5-4A0A0C4DH59 114 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 GOLGA6L6A8MZA4 724 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 H7C0S8 307 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 KIF1CO43896 1103 aaKnown RBP12.89□□□□□ -0.35
H3F3B-213ENST00000593254 RASSF9O75901 435 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 STK17BO94768 372 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 AP2A1O95782 977 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 DLGAP3O95886 979 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 MTHFD1P11586 935 aaKnown RBP12.89□□□□□ -0.35
H3F3B-213ENST00000593254 OAS2P29728 719 aaKnown RBP12.89□□□□□ -0.35
H3F3B-213ENST00000593254 PRLHRP49683 370 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 TMPRSS15P98073 1019 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 CDC20Q12834 499 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 GPR33Q49SQ1 333 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 TIPARPQ7Z3E1 657 aaKnown RBP12.89□□□□□ -0.35
H3F3B-213ENST00000593254 ATCAYQ86WG3 371 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 NLGN4XQ8N0W4 816 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 NLGN4YQ8NFZ3 816 aaPredicted RBP12.89□□□□□ -0.35
H3F3B-213ENST00000593254 HEXDCQ8WVB3 486 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 UBE2Q2Q8WVN8 375 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 APOBEC4Q8WW27 367 aaKnown RBP12.89□□□□□ -0.35
H3F3B-213ENST00000593254 ATG4AQ8WYN0 398 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 KLHL6Q8WZ60 621 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 ZDHHC12Q96GR4 267 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 DNAJC1Q96KC8 554 aaKnown RBP12.89□□□□□ -0.35
H3F3B-213ENST00000593254 INSM2Q96T92 566 aaPredicted RBP12.89□□□□□ -0.35
H3F3B-213ENST00000593254 COPS8Q99627 209 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 TSGA10Q9BZW7 698 aa12.89□□□□□ -0.35
H3F3B-213ENST00000593254 IMP3Q9NV31 184 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms