RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 DNAAF3Q8N9W5 541 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 HM13Q8TCT9 377 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 RNF31Q96EP0 1072 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 ZDHHC12Q96GR4 267 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 SEMA4CQ9C0C4 833 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 RAB33BQ9H082 229 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 PILRAQ9UKJ1 303 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 ATRXP46100 2492 aa13.56□□□□□ -0.24
APOC1-208ENST00000592535 OR51F1A6NGY5 319 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 E7EVH7 732 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 STK17BO94768 372 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 SUN1O94901 812 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 ZSCAN5DPP0CG00 497 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 LIFP15018 202 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 PSMA3P25788 255 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 MSNP26038 577 aaKnown RBP13.55□□□□□ -0.24
APOC1-208ENST00000592535 LMAN1P49257 510 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 CYP4F2P78329 520 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 C19orf57Q0VDD7 668 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 SEMA5AQ13591 1074 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 CCNG2Q16589 344 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 DBN1Q16643 649 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 ZNF658BQ4V348 819 aaPredicted RBP13.55□□□□□ -0.24
APOC1-208ENST00000592535 CAPRIN2Q6IMN6 1127 aaKnown RBP13.55□□□□□ -0.24
APOC1-208ENST00000592535 PPP1R21Q6ZMI0 780 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 TIPARPQ7Z3E1 657 aaKnown RBP13.55□□□□□ -0.24
APOC1-208ENST00000592535 NLGN4XQ8N0W4 816 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 ZNF843Q8N446 348 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 CLDN19Q8N6F1 224 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 ZSCAN1Q8NBB4 408 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 NLGN4YQ8NFZ3 816 aaPredicted RBP13.55□□□□□ -0.24
APOC1-208ENST00000592535 KLHL6Q8WZ60 621 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 OR6C1Q96RD1 312 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 ZPBPQ9BS86 351 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 TLR10Q9BXR5 811 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 COG4Q9H9E3 785 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 RAB6BQ9NRW1 208 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 SLC24A2Q9UI40 661 aa13.55□□□□□ -0.24
APOC1-208ENST00000592535 TMEM184BQ9Y519 407 aaPredicted RBP13.55□□□□□ -0.24
APOC1-208ENST00000592535 C17orf113A0A1B0GUU1 675 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 CCDC162PA2VCL2 907 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 FOXN2P32314 431 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 RPL22P35268 128 aaKnown RBP13.54□□□□□ -0.24
APOC1-208ENST00000592535 SKIDA1Q1XH10 827 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 LINC00303Q3SY05 128 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 KLHL35Q6PF15 583 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 CCDC89Q8N998 374 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 TRIM58Q8NG06 486 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 OR13J1Q8NGT2 312 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 ELMO2Q96JJ3 720 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 CCM2Q9BSQ5 444 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 SLC12A9Q9BXP2 914 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 KIR3DX1Q9H7L2 352 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 CASS4Q9NQ75 786 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 SMARCAL1Q9NZC9 954 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 SEMA5BQ9P283 1151 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 PAK5Q9P286 719 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 SLC2A6Q9UGQ3 507 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 PPP2R2CQ9Y2T4 447 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 PRSS21Q9Y6M0 314 aa13.54□□□□□ -0.24
APOC1-208ENST00000592535 IGHV5-51A0A0C4DH38 117 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 LOC101059948A0A1B0GTJ6 334 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 HEATR9A2RTY3 570 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 OR5K3A6NET4 321 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 DLGAP3O95886 979 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 GAS8O95995 478 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 FGGP02679 453 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 APRTP07741 180 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 ZNF28P17035 718 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 NELFEP18615 380 aaKnown RBP13.53□□□□□ -0.24
APOC1-208ENST00000592535 MAP4P27816 1152 aaKnown RBP13.53□□□□□ -0.24
APOC1-208ENST00000592535 ARCN1P48444 511 aaKnown RBP13.53□□□□□ -0.24
APOC1-208ENST00000592535 ITIH4Q14624 930 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 DNTTIP2Q5QJE6 756 aaKnown RBP13.53□□□□□ -0.24
APOC1-208ENST00000592535 TSTD2Q5T7W7 516 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 DRICH1Q6PGQ1 229 aaPredicted RBP13.53□□□□□ -0.24
APOC1-208ENST00000592535 OOSP2Q86WS3 158 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 UNC5BQ8IZJ1 945 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 ZFPM2Q8WW38 1151 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 UBXN4Q92575 508 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 EXTL1Q92935 676 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 HDAC10Q969S8 669 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 ZNF778Q96MU6 729 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 RANBP9Q96S59 729 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 MAP3K3Q99759 626 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 ULBP3Q9BZM4 244 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 OR52A5Q9H2C5 316 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 VPS37BQ9H9H4 285 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 HRASLS2Q9NWW9 162 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 DRG1Q9Y295 367 aaKnown RBP13.53□□□□□ -0.24
APOC1-208ENST00000592535 COLEC10Q9Y6Z7 277 aa13.53□□□□□ -0.24
APOC1-208ENST00000592535 COL6A6A6NMZ7 2263 aa13.52□□□□□ -0.24
APOC1-208ENST00000592535 ATMQ13315 3056 aa13.52□□□□□ -0.24
APOC1-208ENST00000592535 OR6C74A6NCV1 312 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 GOLGA6L3A6NEY3 463 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 CEP104O60308 925 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 AP2A2O94973 939 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 GOT2P00505 430 aaKnown RBP13.52□□□□□ -0.25
APOC1-208ENST00000592535 ITGB2P05107 769 aa13.52□□□□□ -0.25
APOC1-208ENST00000592535 ADRA1DP25100 572 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms