RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 KATNAL2Q8IYT4 538 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 ZNF567Q8N184 647 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 GALNT6Q8NCL4 622 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 C9orf43Q8TAL5 461 aaPredicted RBP10.18□□□□□ -0.78
VPS4B-207ENST00000591519 GDAP1Q8TB36 358 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 UBXN4Q92575 508 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 HAUS1Q96CS2 278 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 OXNAD1Q96HP4 312 aaPredicted RBP10.18□□□□□ -0.78
VPS4B-207ENST00000591519 ZNF514Q96K75 400 aaPredicted RBP10.18□□□□□ -0.78
VPS4B-207ENST00000591519 C19orf43Q9BQ61 176 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 ZCCHC2Q9C0B9 1178 aaKnown RBP10.18□□□□□ -0.78
VPS4B-207ENST00000591519 EPN3Q9H201 632 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 UGT1A7Q9HAW7 530 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 UGT1A10Q9HAW8 530 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 UGT1A8Q9HAW9 530 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 ZNF71Q9NQZ8 489 aaPredicted RBP10.18□□□□□ -0.78
VPS4B-207ENST00000591519 CROTQ9UKG9 612 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 GUCA1BQ9UMX6 200 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 PACSIN2Q9UNF0 486 aaPredicted RBP10.18□□□□□ -0.78
VPS4B-207ENST00000591519 HECTD1Q9ULT8 2610 aa10.18□□□□□ -0.78
VPS4B-207ENST00000591519 ZNF106Q9H2Y7 1883 aaKnown RBP10.17□□□□□ -0.78
VPS4B-207ENST00000591519 hCG_1818297A0A087WSY0 165 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 IGHV5-51A0A0C4DH38 117 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 GLYATL1P3A0A0U1RQE8 302 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 GRID2IPA4D2P6 1211 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 MGAT4DA6NG13 374 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 AGAP14A8MT82 685 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 C21orf140B9A014 251 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 CREG1O75629 220 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 KIAA0754O94854 1291 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 FTCDO95954 541 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 PTMAP06454 111 aaKnown RBP10.17□□□□□ -0.78
VPS4B-207ENST00000591519 VSIG8P0DPA2 414 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 TNNT3P45378 269 aaPredicted RBP10.17□□□□□ -0.78
VPS4B-207ENST00000591519 CTSCP53634 463 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 MSLNQ13421 630 aaPredicted RBP10.17□□□□□ -0.78
VPS4B-207ENST00000591519 SEPT6Q14141 434 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 NOMO1Q15155 1222 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 SKIDA1Q1XH10 827 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 GPRC6AQ5T6X5 926 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 TCTN3Q6NUS6 607 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 C16orf46Q6P387 395 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 FAM151BQ6UXP7 276 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 RANBP10Q6VN20 620 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 FAM83HQ6ZRV2 1179 aaPredicted RBP10.17□□□□□ -0.78
VPS4B-207ENST00000591519 FAM92BQ6ZTR7 304 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 ZC3H18Q86VM9 953 aaKnown RBP10.17□□□□□ -0.78
VPS4B-207ENST00000591519 RASGRP3Q8IV61 690 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 CARFQ8N187 725 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 SLC25A41Q8N5S1 370 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 MEIOBQ8N635 442 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 BEND7Q8N7W2 519 aaPredicted RBP10.17□□□□□ -0.78
VPS4B-207ENST00000591519 ZNF398Q8TD17 642 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 LINC00615Q96LM1 132 aaPredicted RBP10.17□□□□□ -0.78
VPS4B-207ENST00000591519 CD180Q99467 661 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 HEMGNQ9BXL5 484 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 PDE7BQ9NP56 450 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 KLHL8Q9P2G9 620 aaPredicted RBP10.17□□□□□ -0.78
VPS4B-207ENST00000591519 ACSL5Q9ULC5 683 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 EFR3BQ9Y2G0 817 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 PKP3Q9Y446 797 aa10.17□□□□□ -0.78
VPS4B-207ENST00000591519 MRPS18BQ9Y676 258 aaKnown RBP10.17□□□□□ -0.78
VPS4B-207ENST00000591519 CLEC18AA5D8T8 446 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 C5orf60A6NFR6 353 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 BTNL10A8MVZ5 291 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 ANXA9O76027 345 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 AGTP01019 485 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 FURINP09958 794 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 MTHFD1P11586 935 aaKnown RBP10.16□□□□□ -0.78
VPS4B-207ENST00000591519 FOLR1P15328 257 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 CCZ1BP86790 482 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 CCZ1P86791 482 aaPredicted RBP10.16□□□□□ -0.78
VPS4B-207ENST00000591519 ACY1Q03154 408 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 SRSF1Q07955 248 aaKnown RBP eCLIP10.16□□□□□ -0.78
VPS4B-207ENST00000591519 ERV3-1Q14264 604 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 NFE2L1Q14494 772 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 TAF1AQ15573 450 aaPredicted RBP10.16□□□□□ -0.78
VPS4B-207ENST00000591519 PPP2R5EQ16537 467 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 LONRF2Q1L5Z9 754 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 LACTB2Q53H82 288 aaPredicted RBP10.16□□□□□ -0.78
VPS4B-207ENST00000591519 ATP1A1-AS1Q5TC04 95 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 PWWP2BQ6NUJ5 590 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 IRGCQ6NXR0 463 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 AADACL2Q6P093 401 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 CLEC18BQ6UXF7 455 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 BBS12Q6ZW61 710 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 PEX26Q7Z412 305 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 GLT6D1Q7Z4J2 308 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 APLFQ8IW19 511 aaPredicted RBP10.16□□□□□ -0.78
VPS4B-207ENST00000591519 TXLNBQ8N3L3 684 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 D2HGDHQ8N465 521 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 CLEC18CQ8NCF0 446 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 OR2L2Q8NH16 312 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 BLOC1S5Q8TDH9 187 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 SEC14L1Q92503 715 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 STAMBPL1Q96FJ0 436 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 QKIQ96PU8 341 aaKnown RBP eCLIP10.16□□□□□ -0.78
VPS4B-207ENST00000591519 INSM2Q96T92 566 aaPredicted RBP10.16□□□□□ -0.78
VPS4B-207ENST00000591519 GPR87Q9BY21 358 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 LZTFL1Q9NQ48 299 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms