RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 TRIM74Q86UV6 250 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 CACTIN-AS1Q8N1I8 211 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 RASGEF1AQ8N9B8 481 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 MZB1Q8WU39 189 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 ISL2Q96A47 359 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 PGM2Q96G03 612 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 SCARF2Q96GP6 870 aaPredicted RBP16.32■□□□□ 0.2
GCDH-213ENST00000590627 ZNF514Q96K75 400 aaPredicted RBP16.32■□□□□ 0.2
GCDH-213ENST00000590627 SH3GL2Q99962 352 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 NRSN2Q9GZP1 204 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 OR2AG1Q9H205 316 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 CCDC68Q9H2F9 335 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 ACBD3Q9H3P7 528 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 RMI1Q9H9A7 625 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 ATXN10Q9UBB4 475 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 CTNNAL1Q9UBT7 734 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 SLC17A4Q9Y2C5 497 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 MTO1Q9Y2Z2 717 aaKnown RBP16.32■□□□□ 0.2
GCDH-213ENST00000590627 VWA7Q9Y334 891 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 PRSS21Q9Y6M0 314 aa16.32■□□□□ 0.2
GCDH-213ENST00000590627 FAM95CA0A1B0GW59 222 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 SMIM23A6NLE4 172 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 TNFRSF10CO14798 259 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 CHUKO15111 745 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 NUAK1O60285 661 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 CDK14O94921 469 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 MYZAPP0CAP1 466 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 CKMT2P17540 419 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 KELP23276 732 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 RTP5Q14D33 572 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 BCL7AQ4VC05 210 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 TNFAIP8L3Q5GJ75 292 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 RBM20Q5T481 1227 aaKnown RBP16.31■□□□□ 0.2
GCDH-213ENST00000590627 ZNF648Q5T619 568 aaPredicted RBP16.31■□□□□ 0.2
GCDH-213ENST00000590627 MROH9Q5TGP6 573 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 HES3Q5TGS1 186 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 HECTD2Q5U5R9 776 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 FAM45BPQ6NSW5 357 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 Q6ZSR6 202 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 DCP2Q8IU60 420 aaKnown RBP16.31■□□□□ 0.2
GCDH-213ENST00000590627 CYP4X1Q8N118 509 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 CLDN19Q8N6F1 224 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 GPATCH11Q8N954 259 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 FAM45AQ8TCE6 357 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 KCNJ9Q92806 393 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 GPR34Q9UPC5 381 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 MED16Q9Y2X0 877 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 ASXL3Q9C0F0 2248 aa16.31■□□□□ 0.2
GCDH-213ENST00000590627 TRIM49D1C9J1S8 452 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 OPA1O60313 960 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 DNAJC6O75061 913 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 CEACAM5P06731 702 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 GSTM1P09488 218 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 OR56A5P0C7T3 313 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 ZNF8P17098 575 aaPredicted RBP16.3■□□□□ 0.2
GCDH-213ENST00000590627 FDXRP22570 491 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 HTR1BP28222 390 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 MAGEA12P43365 314 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 PRLHRP49683 370 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 CSRP3P50461 194 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 CTSCP53634 463 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 TIAL1Q01085 375 aaKnown RBP eCLIP16.3■□□□□ 0.2
GCDH-213ENST00000590627 GSTM4Q03013 218 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 TARDBPQ13148 414 aaKnown RBP eCLIP16.3■□□□□ 0.2
GCDH-213ENST00000590627 BMPR2Q13873 1038 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 GTF2H3Q13889 308 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 PDE1CQ14123 709 aaPredicted RBP16.3■□□□□ 0.2
GCDH-213ENST00000590627 TMED2Q15363 201 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 ZKSCAN8Q15776 578 aaPredicted RBP16.3■□□□□ 0.2
GCDH-213ENST00000590627 PTRHD1Q6GMV3 140 aaKnown RBP16.3■□□□□ 0.2
GCDH-213ENST00000590627 ACVR1CQ8NER5 493 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 OR13H1Q8NG92 308 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 SGF29Q96ES7 293 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 KLHDC7BQ96G42 594 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 ATXN7L3BQ96GX2 97 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 ELMO2Q96JJ3 720 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 LINC00615Q96LM1 132 aaPredicted RBP16.3■□□□□ 0.2
GCDH-213ENST00000590627 WDR92Q96MX6 357 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 BBC3Q96PG8 261 aaPredicted RBP16.3■□□□□ 0.2
GCDH-213ENST00000590627 NDNQ99608 321 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 TMBIM4Q9HC24 238 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 LATS2Q9NRM7 1088 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 KLHL42Q9P2K6 505 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 TBK1Q9UHD2 729 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 TMEM98Q9Y2Y6 226 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 BPTFQ12830 3046 aa16.3■□□□□ 0.2
GCDH-213ENST00000590627 TMEM202A6NGA9 273 aa16.29■□□□□ 0.2
GCDH-213ENST00000590627 GOLGA6L10A6NI86 522 aa16.29■□□□□ 0.2
GCDH-213ENST00000590627 RGS16O15492 202 aaPredicted RBP16.29■□□□□ 0.2
GCDH-213ENST00000590627 ASMTLO95671 621 aa16.29■□□□□ 0.2
GCDH-213ENST00000590627 ACP1P24666 158 aa16.29■□□□□ 0.2
GCDH-213ENST00000590627 EIF2S3P41091 472 aaKnown RBP16.29■□□□□ 0.2
GCDH-213ENST00000590627 SKIV2L2P42285 1042 aaKnown RBP16.29■□□□□ 0.2
GCDH-213ENST00000590627 CDKN2DP55273 166 aa16.29■□□□□ 0.2
GCDH-213ENST00000590627 CLDN6P56747 220 aa16.29■□□□□ 0.2
GCDH-213ENST00000590627 TAS2R39P59534 338 aa16.29■□□□□ 0.2
GCDH-213ENST00000590627 PTK2BQ14289 1009 aa16.29■□□□□ 0.2
GCDH-213ENST00000590627 USP10Q14694 798 aaKnown RBP16.29■□□□□ 0.2
GCDH-213ENST00000590627 PROX2Q3B8N5 592 aa16.29■□□□□ 0.2
GCDH-213ENST00000590627 TPRG1LQ5T0D9 272 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms