RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 ITGB2P05107 769 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 ZSCAN5DPP0CG00 497 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 VCLP18206 1134 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 NELFEP18615 380 aaKnown RBP16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 CDC25BP30305 580 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 HALP42357 657 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 PRLHRP49683 370 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 KPNA2P52292 529 aaKnown RBP16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 SNX1Q13596 522 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 PRPSAP1Q14558 356 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 SIX1Q15475 284 aaPredicted RBP16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 OASLQ15646 514 aaKnown RBP16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 GPR19Q15760 415 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 LONRF2Q1L5Z9 754 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 PARP6Q2NL67 630 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 FAM69BQ5VUD6 431 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 CAPRIN2Q6IMN6 1127 aaKnown RBP16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 SPNS2Q8IVW8 549 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 CFAP206Q8IYR0 622 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 AVL9Q8NBF6 648 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 PHC3Q8NDX5 983 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 SLC45A3Q96JT2 553 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 SLC41A2Q96JW4 573 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 SEMA5BQ9P283 1151 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 CROTQ9UKG9 612 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 RPS6KL1Q9Y6S9 549 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 MYO18BQ8IUG5 2567 aa16.43■□□□□ 0.22
CROCCP3-203ENST00000589964 CCDC162PA2VCL2 907 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 OR5K3A6NET4 321 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 K7EM74 188 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 LIASO43766 372 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 SPAG6O75602 509 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 STK10O94804 968 aaKnown RBP16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 AP2A1O95782 977 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 CDC20Q12834 499 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 KIF5AQ12840 1032 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 PLCL1Q15111 1095 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 ZRANB3Q5FWF4 1079 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 PWWP2BQ6NUJ5 590 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 PRICKLE2Q7Z3G6 844 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 SNX20Q7Z614 316 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 LMNTD1Q8N9Z9 388 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 STARD8Q92502 1023 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 TEFMQ96QE5 360 aaKnown RBP16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 KLHL25Q9H0H3 589 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 OR52A5Q9H2C5 316 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 XKR8Q9H6D3 395 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 COG4Q9H9E3 785 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 ETNK1Q9HBU6 452 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 NLE1Q9NVX2 485 aaPredicted RBP16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 GUCA1BQ9UMX6 200 aa16.42■□□□□ 0.22
CROCCP3-203ENST00000589964 MROH6A6NGR9 719 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 MIF4GDA9UHW6 222 aaKnown RBP16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 J3QKU1 62 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 SLC28A2O43868 658 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 CRTAMO95727 393 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 TPBGLP0DKB5 382 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 FGF5P12034 268 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 PVRP15151 417 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 POLR2CP19387 275 aaPredicted RBP16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 NR1D1P20393 614 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 ITGALP20701 1170 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 ACRV1P26436 265 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 POLE2P56282 527 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 RPS18P62269 152 aaKnown RBP16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 SEMA3AQ14563 771 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 LCN10Q6JVE6 187 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 C16orf46Q6P387 395 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 FAM199XQ6PEV8 388 aaPredicted RBP16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 PTRH1Q86Y79 214 aaKnown RBP16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 UBL4BQ8N7F7 174 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 SLC38A9Q8NBW4 561 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 OR4E2Q8NGC2 313 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 OR13J1Q8NGT2 312 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 HM13Q8TCT9 377 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 LKAAEAR1Q8TD35 194 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 CT55Q8WUE5 264 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 CDKN2AIPNLQ96HQ2 116 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 LINC00615Q96LM1 132 aaPredicted RBP16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 COPS8Q99627 209 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 KIR3DX1Q9H7L2 352 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 ZDHHC3Q9NYG2 299 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 LNPEPQ9UIQ6 1025 aa16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 DNMT3AQ9Y6K1 912 aaPredicted RBP16.41■□□□□ 0.22
CROCCP3-203ENST00000589964 ZNF891A8MT65 544 aaPredicted RBP16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 BTN3A3O00478 584 aa16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 OR1I1O60431 355 aa16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 NTRK1P04629 796 aa16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 SLC35G4P0C7Q5 338 aa16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 ATP1B2P14415 290 aaPredicted RBP16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 MAP4P27816 1152 aaKnown RBP16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 FOXN2P32314 431 aa16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 ABHD18Q0P651 414 aa16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 TUBB3Q13509 450 aa16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 BRD3Q15059 726 aa16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 DEFB109BQ30KR1 87 aa16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 DNTTIP2Q5QJE6 756 aaKnown RBP16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 TAS2R42Q7RTR8 314 aa16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 SLC13A5Q86YT5 568 aaPredicted RBP16.4■□□□□ 0.22
CROCCP3-203ENST00000589964 RASGRP3Q8IV61 690 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms