RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PIH1D3Q9NQM4 214 aaKnown RBP3.34□□□□□ -1.87
SMAD4-207ENST00000589076 B3GALT5Q9Y2C3 310 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 CCL27Q9Y4X3 112 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 YIPF1Q9Y548 306 aa3.34□□□□□ -1.87
SMAD4-207ENST00000589076 TRBC2A0A5B9 178 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 OR2M5A3KFT3 312 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 OR5K3A6NET4 321 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 A8MXE2 369 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 ZNF587BE7ETH6 402 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 BMPR1BO00238 502 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 DVL1O14640 695 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 ZNHIT1O43257 154 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 SSX4O60224 188 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 CREG1O75629 220 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 PSMD10O75832 226 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 MYOD1P15172 320 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 PFKFB1P16118 471 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 ZNF23P17027 643 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 POLR2CP19387 275 aaPredicted RBP3.33□□□□□ -1.88
SMAD4-207ENST00000589076 VEGFCP49767 419 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 TAF6P49848 677 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 PPP5CP53041 499 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 CD81P60033 236 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 COG7P83436 770 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 SLC20A2Q08357 652 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 GTF2H2Q13888 395 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 RBM39Q14498 530 aaKnown RBP3.33□□□□□ -1.88
SMAD4-207ENST00000589076 NR1D2Q14995 579 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 RAB6CQ53S08 254 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 C1orf141Q5JVX7 400 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 GTF2H2CQ6P1K8 395 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 GFRALQ6UXV0 394 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 DENND5BQ6ZUT9 1274 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 Q75L30 129 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 CHST3Q7LGC8 479 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 CAMKMTQ7Z624 323 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 SATL1Q86VE3 508 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 KMT5CQ86Y97 462 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 SPEM1Q8N4L4 309 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 C1orf52Q8N6N3 182 aaKnown RBP3.33□□□□□ -1.88
SMAD4-207ENST00000589076 TC2NQ8N9U0 490 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 PAPD5Q8NDF8 572 aaKnown RBP3.33□□□□□ -1.88
SMAD4-207ENST00000589076 RBM15BQ8NDT2 890 aaKnown RBP3.33□□□□□ -1.88
SMAD4-207ENST00000589076 RDM1Q8NG50 284 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 WDR20Q8TBZ3 569 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 RMDN1Q96DB5 314 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 ERLEC1Q96DZ1 483 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 SPACA9Q96E40 222 aaPredicted RBP3.33□□□□□ -1.88
SMAD4-207ENST00000589076 ADGRG7Q96K78 797 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 CFAP57Q96MR6 1250 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 RAB6CQ9H0N0 254 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 OLAHQ9NV23 265 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 HAO2Q9NYQ3 351 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 WDR35Q9P2L0 1181 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 OSGIN1Q9UJX0 560 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 POU2F3Q9UKI9 436 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 CGNL1Q0VF96 1302 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 NOTCH3Q9UM47 2321 aa3.33□□□□□ -1.88
SMAD4-207ENST00000589076 ZCWPW2A0A1B0GU75 182 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 HNRNPCL2B2RXH8 293 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 PLK4O00444 970 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 TO15178 435 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 TSPAN1O60635 241 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 GGPS1O95749 300 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 LDLRP01130 860 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 AFPP02771 609 aaKnown RBP3.32□□□□□ -1.88
SMAD4-207ENST00000589076 LINGO3P0C6S8 592 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 FAM106CPP0CH98 169 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 IL15P40933 162 aaPredicted RBP3.32□□□□□ -1.88
SMAD4-207ENST00000589076 AMPHP49418 695 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 RAD23AP54725 363 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 CSE1LP55060 971 aaKnown RBP3.32□□□□□ -1.88
SMAD4-207ENST00000589076 CDH13P55290 713 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 ISL1P61371 349 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 CDK3Q00526 305 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 PLIN5Q00G26 463 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 SNTA1Q13424 505 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 IL11RAQ14626 422 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 SPECC1Q5M775 1068 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 CST9LP1Q5W188 147 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 ZNF449Q6P9G9 518 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 ASB18Q6ZVZ8 466 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 CCDC186Q7Z3E2 898 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 KRT77Q7Z794 578 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 SFR1Q86XK3 245 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 TMEM219Q86XT9 240 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 DCUN1D3Q8IWE4 304 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.32□□□□□ -1.88
SMAD4-207ENST00000589076 FBXO39Q8N4B4 442 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 TTC30BQ8N4P2 665 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 AFAP1Q8N556 730 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 LILRB1Q8NHL6 650 aaPredicted RBP3.32□□□□□ -1.88
SMAD4-207ENST00000589076 EXD1Q8NHP7 514 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 CFAP61Q8NHU2 1237 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 SLC38A5Q8WUX1 472 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 PHF21AQ96BD5 680 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 PRMT6Q96LA8 375 aaPredicted RBP3.32□□□□□ -1.88
SMAD4-207ENST00000589076 FAM81BQ96LP2 452 aa3.32□□□□□ -1.88
SMAD4-207ENST00000589076 ZNF830Q96NB3 372 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms