RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 UBXN7O94888 489 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 AMD1P17707 334 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 RPL22P35268 128 aaKnown RBP11.33□□□□□ -0.6
RFX1-204ENST00000588885 CDKN1CP49918 316 aaPredicted RBP11.33□□□□□ -0.6
RFX1-204ENST00000588885 ZNF140P52738 457 aaPredicted RBP11.33□□□□□ -0.6
RFX1-204ENST00000588885 GFERP55789 205 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 XIAPP98170 497 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 RHDQ02161 417 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 TRA2AQ13595 282 aaKnown RBP eCLIP11.33□□□□□ -0.6
RFX1-204ENST00000588885 NFE2L1Q14494 772 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 POU6F1Q14863 301 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 TRADDQ15628 312 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 DUPD1Q68J44 220 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 WDR74Q6RFH5 385 aaPredicted RBP11.33□□□□□ -0.6
RFX1-204ENST00000588885 ABRAXAS1Q6UWZ7 409 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 TMEM26Q6ZUK4 368 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 ZNF605Q86T29 641 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 DDHD1Q8NEL9 900 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 DTX3LQ8TDB6 740 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 LRRC45Q96CN5 670 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 DNAJC1Q96KC8 554 aaKnown RBP11.33□□□□□ -0.6
RFX1-204ENST00000588885 TGM7Q96PF1 710 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 TAAR9Q96RI9 348 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 DPYSL5Q9BPU6 564 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 ERP44Q9BS26 406 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 ZCCHC2Q9C0B9 1178 aaKnown RBP11.33□□□□□ -0.6
RFX1-204ENST00000588885 RAB17Q9H0T7 212 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 OGFRQ9NZT2 677 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 CRLS1Q9UJA2 301 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 SNX24Q9Y343 169 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 UTP11Q9Y3A2 253 aaKnown RBP11.33□□□□□ -0.6
RFX1-204ENST00000588885 B3GALT1Q9Y5Z6 326 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 CFAP20Q9Y6A4 193 aaKnown RBP11.33□□□□□ -0.6
RFX1-204ENST00000588885 PIEZO2Q9H5I5 2752 aa11.33□□□□□ -0.6
RFX1-204ENST00000588885 COL6A6A6NMZ7 2263 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 PRR19A6NJB7 356 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 LDB2O43679 373 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 KIF1CO43896 1103 aaKnown RBP11.32□□□□□ -0.6
RFX1-204ENST00000588885 POLBP06746 335 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 PRSS56P0CW18 603 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 LIPCP11150 499 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 HALP42357 657 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 RPL21P46778 160 aaKnown RBP11.32□□□□□ -0.6
RFX1-204ENST00000588885 LEPRP48357 1165 aaKnown RBP11.32□□□□□ -0.6
RFX1-204ENST00000588885 SEPHS1P49903 392 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 ARSDP51689 593 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 EPHA4P54764 986 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 TUBB4BP68371 445 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 GPS1Q13098 491 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 GPR18Q14330 331 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 RPE65Q16518 533 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 P3H1Q32P28 736 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 CCDC38Q502W7 563 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 ZRANB3Q5FWF4 1079 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 MANEAQ5SRI9 462 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 AGAP9Q5VTM2 703 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 IZUMO3Q5VZ72 239 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 ANKS6Q68DC2 871 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 KCTD11Q693B1 232 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 TAS2R42Q7RTR8 314 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 ARHGAP22Q7Z5H3 698 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 LSM14AQ8ND56 463 aaKnown RBP11.32□□□□□ -0.6
RFX1-204ENST00000588885 SEC14L1Q92503 715 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 DCUN1D1Q96GG9 259 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 PPP1R2P1Q96PQ5 205 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 LRRC40Q9H9A6 602 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 ARNT2Q9HBZ2 717 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 SLC40A1Q9NP59 571 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 GRHL1Q9NZI5 618 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 PDP2Q9P2J9 529 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 PCDHB11Q9Y5F2 797 aa11.32□□□□□ -0.6
RFX1-204ENST00000588885 GCN1Q92616 2671 aaKnown RBP11.32□□□□□ -0.6
RFX1-204ENST00000588885 LILRA5A6NI73 299 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 K7ENP7 123 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 DNALI1O14645 258 aaPredicted RBP11.31□□□□□ -0.6
RFX1-204ENST00000588885 CAPN5O15484 640 aaPredicted RBP11.31□□□□□ -0.6
RFX1-204ENST00000588885 SEC31AO94979 1220 aaKnown RBP11.31□□□□□ -0.6
RFX1-204ENST00000588885 MYBL2P10244 700 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 WT1P19544 449 aaPredicted RBP11.31□□□□□ -0.6
RFX1-204ENST00000588885 ITGALP20701 1170 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 IVDP26440 423 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 TNFRSF8P28908 595 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 ECHS1P30084 290 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 MC4RP32245 332 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 LMAN1P49257 510 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 CARSP49589 748 aaKnown RBP11.31□□□□□ -0.6
RFX1-204ENST00000588885 PDE1BQ01064 536 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 DCAF12Q5T6F0 453 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 DUS1LQ6P1R4 473 aaKnown RBP11.31□□□□□ -0.6
RFX1-204ENST00000588885 INO80CQ6PI98 192 aaPredicted RBP11.31□□□□□ -0.6
RFX1-204ENST00000588885 ZDHHC24Q6UX98 284 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 WASH2PQ6VEQ5 465 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 FAM92BQ6ZTR7 304 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 PLXDC1Q8IUK5 500 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 CFAP206Q8IYR0 622 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 LILRA3Q8N6C8 439 aaPredicted RBP11.31□□□□□ -0.6
RFX1-204ENST00000588885 AVL9Q8NBF6 648 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 OR52K1Q8NGK4 314 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 GPR150Q8NGU9 434 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 RSC1A1Q92681 617 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms