RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 SLC22A9Q8IVM8 553 aa21.86■■□□□ 1.09
ATG4D-209ENST00000588857 FAM126AQ9BYI3 521 aaPredicted RBP21.86■■□□□ 1.09
ATG4D-209ENST00000588857 PITPNM3Q9BZ71 974 aa21.86■■□□□ 1.09
ATG4D-209ENST00000588857 FGFR1OP2Q9NVK5 253 aa21.86■■□□□ 1.09
ATG4D-209ENST00000588857 NDUFS2O75306 463 aa21.85■■□□□ 1.09
ATG4D-209ENST00000588857 POP7O75817 140 aaKnown RBP21.85■■□□□ 1.09
ATG4D-209ENST00000588857 IGHV4-34P06331 123 aa21.85■■□□□ 1.09
ATG4D-209ENST00000588857 NUDT1P36639 197 aa21.85■■□□□ 1.09
ATG4D-209ENST00000588857 CLDN2P57739 230 aa21.85■■□□□ 1.09
ATG4D-209ENST00000588857 BST1Q10588 318 aa21.85■■□□□ 1.09
ATG4D-209ENST00000588857 LRRTM4Q86VH4 590 aa21.85■■□□□ 1.09
ATG4D-209ENST00000588857 GPSM1Q86YR5 675 aa21.85■■□□□ 1.09
ATG4D-209ENST00000588857 ZNF547Q8IVP9 402 aa21.85■■□□□ 1.09
ATG4D-209ENST00000588857 LINC00615Q96LM1 132 aaPredicted RBP21.85■■□□□ 1.09
ATG4D-209ENST00000588857 CCT8L2Q96SF2 557 aa21.85■■□□□ 1.09
ATG4D-209ENST00000588857 PLXND1Q9Y4D7 1925 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 CACNA1HO95180 2353 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 C17orf113A0A1B0GUU1 675 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 POM121BA6NF01 834 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 NEMP2A6NFY4 417 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 TMEM202A6NGA9 273 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 SUPT3HB4E1H0 165 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 C10orf142B7Z368 130 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 UBXN8O00124 270 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 SUPT3HO75486 399 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 GPC4O75487 556 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 IPO13O94829 963 aaKnown RBP21.84■■□□□ 1.09
ATG4D-209ENST00000588857 SLCO2B1O94956 709 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 FAM107AO95990 144 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 HOXC4P09017 264 aaPredicted RBP21.84■■□□□ 1.09
ATG4D-209ENST00000588857 MPC1LP0DKB6 136 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 CYHR1Q6ZMK1 362 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 NEK10Q6ZWH5 1172 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 FAM160A2Q8N612 972 aaPredicted RBP21.84■■□□□ 1.09
ATG4D-209ENST00000588857 FRMD1Q8N878 549 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 BCAS4Q8TDM0 211 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 BIRC7Q96CA5 298 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 RMI1Q9H9A7 625 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 CYP4F12Q9HCS2 524 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 SLCO1B3Q9NPD5 702 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 ZNHIT2Q9UHR6 403 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 TMCO1Q9UM00 188 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 DMTF1Q9Y222 760 aa21.84■■□□□ 1.09
ATG4D-209ENST00000588857 MGAT4DA6NG13 374 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 A8MT66 165 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 PRAMEF26H0Y7S4 382 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 LIN7AO14910 233 aaPredicted RBP21.83■■□□□ 1.09
ATG4D-209ENST00000588857 KMOO15229 486 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 GRID2O43424 1007 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 GFAPP14136 432 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 DRD4P21917 467 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 KIAA1024LP59773 190 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 DNAJB13P59910 316 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 ANGPT1Q15389 498 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 PLA2G4EQ3MJ16 856 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 RAB44Q7Z6P3 723 aaPredicted RBP21.83■■□□□ 1.09
ATG4D-209ENST00000588857 VRK3Q8IV63 474 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 C1orf210Q8IVY1 113 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 CFAP206Q8IYR0 622 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 OR2L2Q8NH16 312 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 GLMNQ92990 594 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 PHF21BQ96EK2 531 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 THAP1Q9NVV9 213 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 CDYLQ9Y232 598 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 HS3ST3A1Q9Y663 406 aa21.83■■□□□ 1.09
ATG4D-209ENST00000588857 DNMT3AQ9Y6K1 912 aaPredicted RBP21.83■■□□□ 1.09
ATG4D-209ENST00000588857 SLC5A10A0PJK1 596 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 EDF1O60869 148 aaKnown RBP21.82■■□□□ 1.08
ATG4D-209ENST00000588857 KELP23276 732 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 NAGLUP54802 743 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 ARHGAP8P85298 464 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 NFKB2Q00653 900 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 PLOD1Q02809 727 aaPredicted RBP21.82■■□□□ 1.08
ATG4D-209ENST00000588857 CFAP157Q5JU67 520 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 SBSNQ6UWP8 590 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 MAMSTRQ6ZN01 415 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 AMZ2Q86W34 360 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 HM13Q8TCT9 377 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 SPACA7Q96KW9 195 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 GATA5Q9BWX5 397 aaPredicted RBP21.82■■□□□ 1.08
ATG4D-209ENST00000588857 SPATA6Q9NWH7 488 aaPredicted RBP21.82■■□□□ 1.08
ATG4D-209ENST00000588857 NCKIPSDQ9NZQ3 722 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 CD274Q9NZQ7 290 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 SLC17A4Q9Y2C5 497 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 CA5BQ9Y2D0 317 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 PRKAB1Q9Y478 270 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 CEP192Q8TEP8 1941 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 TMEM114B3SHH9 223 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 NDUFAB1O14561 156 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 TOR1BO14657 336 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 AXIN1O15169 862 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 SNX2O60749 519 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 S100BP04271 92 aaPredicted RBP21.82■■□□□ 1.08
ATG4D-209ENST00000588857 CEACAM5P06731 702 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 C8GP07360 202 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 MTHFD2P13995 350 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 HTR1BP28222 390 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 PREPP48147 710 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 SLC1A6P48664 564 aa21.82■■□□□ 1.08
ATG4D-209ENST00000588857 NFATC4Q14934 902 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms