RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 C7orf26Q96N11 449 aa30.45■■■□□ 2.47
CAPNS1-206ENST00000588815 CCT8L2Q96SF2 557 aa30.45■■■□□ 2.47
CAPNS1-206ENST00000588815 RDH14Q9HBH5 336 aa30.45■■■□□ 2.47
CAPNS1-206ENST00000588815 IKZF3Q9UKT9 509 aa30.45■■■□□ 2.47
CAPNS1-206ENST00000588815 LRP4O75096 1905 aa30.45■■■□□ 2.46
CAPNS1-206ENST00000588815 GRID2O43424 1007 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 KLK8O60259 260 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 KCNJ13O60928 360 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 NDUFS2O75306 463 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 SNNO75324 88 aaPredicted RBP30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 POP7O75817 140 aaKnown RBP30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 ENO2P09104 434 aaPredicted RBP30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 MTHFD2P13995 350 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 DOK6Q6PKX4 331 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 SBSNQ6UWP8 590 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 FRA10AC1Q70Z53 315 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 RAB44Q7Z6P3 723 aaPredicted RBP30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 C11orf96Q7Z7L8 435 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 CADM4Q8NFZ8 388 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 SPACA7Q96KW9 195 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 NUDT4Q9NZJ9 180 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 NCKIPSDQ9NZQ3 722 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 OARD1Q9Y530 152 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 CCDC163A0A0D9SF12 145 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 K7ESF4 209 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 DCXO43602 365 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 FSBPO95073 299 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 DRD4P21917 467 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 PFN3P60673 137 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 ARHGAP8P85298 464 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 RPA4Q13156 261 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 CDKL4Q5MAI5 379 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 SLC22A15Q8IZD6 547 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 BCAS4Q8TDM0 211 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 BIRC7Q96CA5 298 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 SCARF2Q96GP6 870 aaPredicted RBP30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 DPEP2Q9H4A9 486 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 FGFR1OP2Q9NVK5 253 aa30.44■■■□□ 2.46
CAPNS1-206ENST00000588815 TECTAO75443 2155 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 POM121BA6NF01 834 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 AXIN1O15169 862 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 AOC1P19801 751 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 HTR1BP28222 390 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 NFATC4Q14934 902 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 TGFBIQ15582 683 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 PPP1R3AQ16821 1122 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 NAPRTQ6XQN6 538 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 SLC36A4Q6YBV0 504 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 AMZ2Q86W34 360 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 L3HYPDHQ96EM0 354 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 BMFQ96LC9 184 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 GATA5Q9BWX5 397 aaPredicted RBP30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 COG4Q9H9E3 785 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 GULP1Q9UBP9 304 aa30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 ZBTB32Q9Y2Y4 487 aaPredicted RBP30.43■■■□□ 2.46
CAPNS1-206ENST00000588815 NCOR1O75376 2440 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 TMEM202A6NGA9 273 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 SUPT3HB4E1H0 165 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 STX16-NPEPL1H3BU86 382 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 UBXN8O00124 270 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 STX16O14662 325 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 NPHS1O60500 1241 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 SUPT3HO75486 399 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 CEACAM5P06731 702 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 GFAPP14136 432 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 IMPDH1P20839 514 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 OCRLQ01968 901 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 USP39Q53GS9 565 aaKnown RBP30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 CRTC3Q6UUV7 619 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 GCNT7Q6ZNI0 430 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 ZCCHC23Q6ZST2 131 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 ABI3BPQ7Z7G0 1075 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 FBXO39Q8N4B4 442 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 RLN3Q8WXF3 142 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 ASB11Q8WXH4 323 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 MYOCQ99972 504 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 TIMM29Q9BSF4 260 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 TRIM54Q9BYV2 358 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 SLCO1B3Q9NPD5 702 aa30.42■■■□□ 2.46
CAPNS1-206ENST00000588815 A0A1W2PPC4 97 aa30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 TNFRSF10CO14798 259 aa30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 MATN4O95460 622 aa30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 RABIFP47224 123 aa30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 SLC1A6P48664 564 aa30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 ALDH18A1P54886 795 aaKnown RBP30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 ABCE1P61221 599 aaKnown RBP30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 DMPKQ09013 629 aa30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 FAM47EQ6ZV65 393 aa30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 CNDP1Q96KN2 507 aa30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 NECAB3Q96P71 396 aaPredicted RBP30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 SLC12A9Q9BXP2 914 aa30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 ZKSCAN7Q9P0L1 754 aaPredicted RBP30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 CACNA1IQ9P0X4 2223 aa30.41■■■□□ 2.46
CAPNS1-206ENST00000588815 NEMP2A6NFY4 417 aa30.4■■■□□ 2.46
CAPNS1-206ENST00000588815 GFYI3L273 518 aa30.4■■■□□ 2.46
CAPNS1-206ENST00000588815 SNX2O60749 519 aa30.4■■■□□ 2.46
CAPNS1-206ENST00000588815 S100BP04271 92 aaPredicted RBP30.4■■■□□ 2.46
CAPNS1-206ENST00000588815 VCLP18206 1134 aa30.4■■■□□ 2.46
CAPNS1-206ENST00000588815 PBLDP30039 288 aaPredicted RBP30.4■■■□□ 2.46
CAPNS1-206ENST00000588815 NAGLUP54802 743 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms