RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ZNF140P52738 457 aaPredicted RBP14□□□□□ -0.17
VMP1-206ENST00000587945 TUBB3Q13509 450 aa14□□□□□ -0.17
VMP1-206ENST00000587945 ERV3-1Q14264 604 aa14□□□□□ -0.17
VMP1-206ENST00000587945 LARP7Q4G0J3 582 aaKnown RBP eCLIP14□□□□□ -0.17
VMP1-206ENST00000587945 BCL7AQ4VC05 210 aa14□□□□□ -0.17
VMP1-206ENST00000587945 COLEC12Q5KU26 742 aa14□□□□□ -0.17
VMP1-206ENST00000587945 DNTTIP2Q5QJE6 756 aaKnown RBP14□□□□□ -0.17
VMP1-206ENST00000587945 PWWP2BQ6NUJ5 590 aa14□□□□□ -0.17
VMP1-206ENST00000587945 KLHL35Q6PF15 583 aa14□□□□□ -0.17
VMP1-206ENST00000587945 FBXO38Q6PIJ6 1188 aa14□□□□□ -0.17
VMP1-206ENST00000587945 TMEM135Q86UB9 458 aa14□□□□□ -0.17
VMP1-206ENST00000587945 C9orf43Q8TAL5 461 aaPredicted RBP14□□□□□ -0.17
VMP1-206ENST00000587945 APOBEC4Q8WW27 367 aaKnown RBP14□□□□□ -0.17
VMP1-206ENST00000587945 UBXN4Q92575 508 aa14□□□□□ -0.17
VMP1-206ENST00000587945 DCUN1D1Q96GG9 259 aa14□□□□□ -0.17
VMP1-206ENST00000587945 RMDN2Q96LZ7 410 aa14□□□□□ -0.17
VMP1-206ENST00000587945 PPM1MQ96MI6 270 aa14□□□□□ -0.17
VMP1-206ENST00000587945 AKIRIN1Q9H9L7 192 aaPredicted RBP14□□□□□ -0.17
VMP1-206ENST00000587945 PDE7BQ9NP56 450 aa14□□□□□ -0.17
VMP1-206ENST00000587945 TUBD1Q9UJT1 453 aa14□□□□□ -0.17
VMP1-206ENST00000587945 RARRES3Q9UL19 164 aa14□□□□□ -0.17
VMP1-206ENST00000587945 ACSL5Q9ULC5 683 aa14□□□□□ -0.17
VMP1-206ENST00000587945 PACSIN2Q9UNF0 486 aaPredicted RBP14□□□□□ -0.17
VMP1-206ENST00000587945 A0A0U1RQJ8 604 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 UBA6A0AVT1 1052 aaPredicted RBP13.99□□□□□ -0.17
VMP1-206ENST00000587945 OR6C74A6NCV1 312 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 GOLGA6L3A6NEY3 463 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 BTNL10A8MVZ5 291 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 DDX3YO15523 660 aaKnown RBP13.99□□□□□ -0.17
VMP1-206ENST00000587945 LDB2O43679 373 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 CRTAMO95727 393 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 NTRK1P04629 796 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 SLC35G4P0C7Q5 338 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 CCNYL3P0C7X3 344 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 TPH1P17752 444 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 CETN2P41208 172 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 ARL4DP49703 201 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 VAV2P52735 878 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 TLE1Q04724 770 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 GSE1Q14687 1217 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 NXPE1Q8N323 547 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 FAM71DQ8N9W8 422 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 CT55Q8WUE5 264 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 ABHD17AQ96GS6 310 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 MRFAP1L1Q96HT8 127 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 DNAJC1Q96KC8 554 aaKnown RBP13.99□□□□□ -0.17
VMP1-206ENST00000587945 CALR3Q96L12 384 aaKnown RBP13.99□□□□□ -0.17
VMP1-206ENST00000587945 LINC00615Q96LM1 132 aaPredicted RBP13.99□□□□□ -0.17
VMP1-206ENST00000587945 RUFY1Q96T51 708 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 NRTNQ99748 197 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 LHX9Q9NQ69 397 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 SLC24A2Q9UI40 661 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 PADI1Q9ULC6 663 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 PCDHB3Q9Y5E6 796 aa13.99□□□□□ -0.17
VMP1-206ENST00000587945 CDC14CA4D256 554 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 TLCD2A6NGC4 264 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 AGAP14A8MT82 685 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 METTL18O95568 372 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 POLR2CP19387 275 aaPredicted RBP13.98□□□□□ -0.17
VMP1-206ENST00000587945 NR1D1P20393 614 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 ITGALP20701 1170 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 MC4RP32245 332 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 PRLHRP49683 370 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 KPNA2P52292 529 aaKnown RBP13.98□□□□□ -0.17
VMP1-206ENST00000587945 DNASE1L3Q13609 305 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 KRT33BQ14525 404 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 GPR19Q15760 415 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 CRTC2Q53ET0 693 aaPredicted RBP13.98□□□□□ -0.17
VMP1-206ENST00000587945 CAPRIN2Q6IMN6 1127 aaKnown RBP13.98□□□□□ -0.17
VMP1-206ENST00000587945 ARMC6Q6NXE6 501 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 FAM199XQ6PEV8 388 aaPredicted RBP13.98□□□□□ -0.17
VMP1-206ENST00000587945 SNX20Q7Z614 316 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 KIAA1328Q86T90 577 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 OOSP2Q86WS3 158 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 TAB3Q8N5C8 712 aaPredicted RBP13.98□□□□□ -0.17
VMP1-206ENST00000587945 OR4E2Q8NGC2 313 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 HM13Q8TCT9 377 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 ULK4Q96C45 1275 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 CD180Q99467 661 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 COPS8Q99627 209 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 EPN3Q9H201 632 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 KIR3DX1Q9H7L2 352 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 ARNT2Q9HBZ2 717 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 FGF21Q9NSA1 209 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 PIH1D1Q9NWS0 290 aaKnown RBP13.98□□□□□ -0.17
VMP1-206ENST00000587945 AMFRQ9UKV5 643 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 R3HDM2Q9Y2K5 976 aaKnown RBP13.98□□□□□ -0.17
VMP1-206ENST00000587945 KCNMB2Q9Y691 235 aa13.98□□□□□ -0.17
VMP1-206ENST00000587945 TCRBV7S2A1N4TA0A589 114 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 PIPSLA2A3N6 862 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 K7EM74 188 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 FTCDO95954 541 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 PTMAP06454 111 aaKnown RBP13.97□□□□□ -0.17
VMP1-206ENST00000587945 RALBP11234 206 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 ATP1B2P14415 290 aaPredicted RBP13.97□□□□□ -0.17
VMP1-206ENST00000587945 HADHAP40939 763 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 GDF10P55107 478 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 HSD11B2P80365 405 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 PDE1BQ01064 536 aa13.97□□□□□ -0.17
VMP1-206ENST00000587945 ACY1Q03154 408 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms