RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 HM13Q8TCT9 377 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 MCOLN3Q8TDD5 553 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 EEF1AKMT1Q8WVE0 214 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 ATL1Q8WXF7 558 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 ATP6V1E2Q96A05 226 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 PHF21BQ96EK2 531 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 PDLIM5Q96HC4 596 aaKnown RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 SEC16BQ96JE7 1060 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 MAGEB10Q96LZ2 347 aaPredicted RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 ERVK-6Q9BXR3 956 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 SLC17A9Q9BYT1 436 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 MKRN2Q9H000 416 aaKnown RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 DRC3Q9H069 523 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 OR2AG1Q9H205 316 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 RMI1Q9H9A7 625 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 FBRSL1Q9HCM7 1045 aaKnown RBP6.09□□□□□ -1.43
LIG3-206ENST00000586058 TRIM39Q9HCM9 518 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 CYP4F12Q9HCS2 524 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 ZNF358Q9NW07 568 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 KCNK4Q9NYG8 393 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 CHD7Q9P2D1 2997 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 FAM8A1Q9UBU6 413 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 MOSPD1Q9UJG1 213 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 GPR34Q9UPC5 381 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 TRIM33Q9UPN9 1127 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 RAP2CQ9Y3L5 183 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 OARD1Q9Y530 152 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 THADAQ6YHU6 1953 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 BRWD1Q9NSI6 2320 aa6.09□□□□□ -1.43
LIG3-206ENST00000586058 CHD9Q3L8U1 2897 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 C17orf113A0A1B0GUU1 675 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 A0A1W2PQF6 199 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 ZNF839A8K0R7 811 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 IQCF5A8MTL0 148 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 UBXN8O00124 270 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 KMOO15229 486 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 FFAR2O15552 330 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 NUAK1O60285 661 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 CCDC22O60826 627 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 KCNJ13O60928 360 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 ADAM23O75077 832 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 SNNO75324 88 aaPredicted RBP6.08□□□□□ -1.44
LIG3-206ENST00000586058 MTX2O75431 263 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 SEMA4FO95754 770 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 SLC35G4P0C7Q5 338 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 GABRG2P18507 467 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 IMPDH1P20839 514 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 CD72P21854 359 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 HNRNPA2B1P22626 353 aaKnown RBP6.08□□□□□ -1.44
LIG3-206ENST00000586058 AOAHP28039 575 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 EEF1DP29692 281 aaKnown RBP6.08□□□□□ -1.44
LIG3-206ENST00000586058 HALP42357 657 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 MLLT3P42568 568 aaPredicted RBP6.08□□□□□ -1.44
LIG3-206ENST00000586058 HNMTP50135 292 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 RPL14P50914 215 aaKnown RBP6.08□□□□□ -1.44
LIG3-206ENST00000586058 NAGLUP54802 743 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 CDK3Q00526 305 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 OCRLQ01968 901 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 CREB5Q02930 508 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 ZP2Q05996 745 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 GALNT1Q10472 559 aaPredicted RBP6.08□□□□□ -1.44
LIG3-206ENST00000586058 OVGP1Q12889 678 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 DLG1Q12959 904 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 PTK2BQ14289 1009 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 TGFBIQ15582 683 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 TBCCQ15814 346 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 PLA2G4EQ3MJ16 856 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 CDKL4Q5MAI5 379 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 SH2D4BQ5SQS7 431 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 SULT1C3Q6IMI6 304 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 ANO7Q6IWH7 933 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 METTL2BQ6P1Q9 378 aaKnown RBP6.08□□□□□ -1.44
LIG3-206ENST00000586058 PNCKQ6P2M8 343 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 TMEM220Q6QAJ8 160 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 CRTC3Q6UUV7 619 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 TRIM67Q6ZTA4 783 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 FRMD7Q6ZUT3 714 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 ISCA2Q86U28 154 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 GALNT13Q8IUC8 556 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 BEND7Q8N7W2 519 aaPredicted RBP6.08□□□□□ -1.44
LIG3-206ENST00000586058 PHC3Q8NDX5 983 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 OR56A4Q8NGH8 313 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 ANKRD49Q8WVL7 239 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 ASB12Q8WXK4 309 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 SNX19Q92543 992 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 EZH1Q92800 747 aaPredicted RBP6.08□□□□□ -1.44
LIG3-206ENST00000586058 L3HYPDHQ96EM0 354 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 MRGPRX1Q96LB2 322 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 LENG8Q96PV6 779 aaPredicted RBP6.08□□□□□ -1.44
LIG3-206ENST00000586058 TMEM237Q96Q45 408 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 LRRC37BQ96QE4 947 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 ATOH8Q96SQ7 321 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 TMEM120AQ9BXJ8 343 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 LMAN1LQ9HAT1 526 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 RDH14Q9HBH5 336 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 LTB4R2Q9NPC1 389 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 SLCO1B3Q9NPD5 702 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 DNAJC28Q9NX36 388 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 ARL15Q9NXU5 204 aa6.08□□□□□ -1.44
LIG3-206ENST00000586058 UTP6Q9NYH9 597 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms