RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 PEAR1Q5VY43 1037 aaPredicted RBP15.84■□□□□ 0.13
SS18-226ENST00000585241 LYSMD4Q5XG99 296 aa15.84■□□□□ 0.13
SS18-226ENST00000585241 CYHR1Q6ZMK1 362 aa15.84■□□□□ 0.13
SS18-226ENST00000585241 AMZ2Q86W34 360 aa15.84■□□□□ 0.13
SS18-226ENST00000585241 SLC22A15Q8IZD6 547 aa15.84■□□□□ 0.13
SS18-226ENST00000585241 TMEM151AQ8N4L1 468 aa15.84■□□□□ 0.13
SS18-226ENST00000585241 EEF1AKMT1Q8WVE0 214 aa15.84■□□□□ 0.13
SS18-226ENST00000585241 TSNARE1Q96NA8 513 aa15.84■□□□□ 0.13
SS18-226ENST00000585241 OR2M4Q96R27 311 aa15.84■□□□□ 0.13
SS18-226ENST00000585241 SELENOSQ9BQE4 189 aa15.84■□□□□ 0.13
SS18-226ENST00000585241 DPEP2Q9H4A9 486 aa15.84■□□□□ 0.13
SS18-226ENST00000585241 TFB2MQ9H5Q4 396 aaKnown RBP15.84■□□□□ 0.13
SS18-226ENST00000585241 KCNK9Q9NPC2 374 aa15.84■□□□□ 0.13
SS18-226ENST00000585241 MRPL40Q9NQ50 206 aaKnown RBP15.84■□□□□ 0.13
SS18-226ENST00000585241 KLQ9UEF7 1012 aa15.84■□□□□ 0.13
SS18-226ENST00000585241 SLC23A2Q9UGH3 650 aa15.84■□□□□ 0.13
SS18-226ENST00000585241 PNMA8BQ9ULN7 279 aaPredicted RBP15.84■□□□□ 0.13
SS18-226ENST00000585241 RUVBL2Q9Y230 463 aaKnown RBP15.84■□□□□ 0.13
SS18-226ENST00000585241 TARM1B6A8C7 271 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 VILLO15195 856 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 SRP54P61011 504 aaKnown RBP15.83■□□□□ 0.12
SS18-226ENST00000585241 HSPA14Q0VDF9 509 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 EIF2B5Q13144 721 aaKnown RBP15.83■□□□□ 0.12
SS18-226ENST00000585241 LRP8Q14114 963 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 KLC3Q6P597 504 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 NAPRTQ6XQN6 538 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 PIWIL4Q7Z3Z4 852 aaKnown RBP15.83■□□□□ 0.12
SS18-226ENST00000585241 ISCA2Q86U28 154 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 RHEBL1Q8TAI7 183 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 FAM76AQ8TAV0 307 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 KIAA1191Q96A73 305 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 TMEM159Q96B96 161 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 MRPL57Q9BQC6 102 aaKnown RBP15.83■□□□□ 0.12
SS18-226ENST00000585241 IQCGQ9H095 443 aaKnown RBP15.83■□□□□ 0.12
SS18-226ENST00000585241 CARS2Q9HA77 564 aaKnown RBP15.83■□□□□ 0.12
SS18-226ENST00000585241 CYP4F12Q9HCS2 524 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 TRNAU1APQ9NX07 287 aaKnown RBP15.83■□□□□ 0.12
SS18-226ENST00000585241 SLC17A7Q9P2U7 560 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 ZNHIT2Q9UHR6 403 aa15.83■□□□□ 0.12
SS18-226ENST00000585241 TLR4O00206 839 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 BCAT2O15382 392 aaPredicted RBP15.82■□□□□ 0.12
SS18-226ENST00000585241 ZBTB14O43829 449 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 RASGRP1O95267 797 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 RBP1P09455 135 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 SBK3P0C264 359 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 TFEBP19484 476 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 ITPKAP23677 461 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 WDR4P57081 412 aaKnown RBP15.82■□□□□ 0.12
SS18-226ENST00000585241 NXPH1P58417 271 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 NFE2L1Q14494 772 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 SYTL3Q4VX76 610 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 METRNLQ641Q3 311 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 LVRNQ6Q4G3 990 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 FAM83HQ6ZRV2 1179 aaPredicted RBP15.82■□□□□ 0.12
SS18-226ENST00000585241 ARMCX6Q7L4S7 300 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 PARGQ86W56 976 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 SPATS2Q86XZ4 545 aaKnown RBP15.82■□□□□ 0.12
SS18-226ENST00000585241 VRK3Q8IV63 474 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 RGL4Q8IZJ4 473 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 MYO1HQ8N1T3 1032 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 FSTL5Q8N475 847 aaPredicted RBP15.82■□□□□ 0.12
SS18-226ENST00000585241 SPATA6LQ8N4H0 392 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 LILRA3Q8N6C8 439 aaPredicted RBP15.82■□□□□ 0.12
SS18-226ENST00000585241 PTERQ96BW5 349 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 FAM111AQ96PZ2 611 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 MIR1-1HGQ9H1L0 117 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 MRPL46Q9H2W6 279 aaKnown RBP15.82■□□□□ 0.12
SS18-226ENST00000585241 C12orf65Q9H3J6 166 aaKnown RBP15.82■□□□□ 0.12
SS18-226ENST00000585241 TM7SF3Q9NS93 570 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 NKIRAS1Q9NYS0 192 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 OGFRQ9NZT2 677 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 XPR1Q9UBH6 696 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 IKZF3Q9UKT9 509 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 PRKAB1Q9Y478 270 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 FANCMQ8IYD8 2048 aa15.82■□□□□ 0.12
SS18-226ENST00000585241 PRR5-ARHGAP8B1AHC4 643 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 KERAO60938 352 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 MATN4O95460 622 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 ACP5P13686 325 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 VCLP18206 1134 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 PBLDP30039 288 aaPredicted RBP15.81■□□□□ 0.12
SS18-226ENST00000585241 HOXD12P35452 270 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 DPP6P42658 865 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 MAPK9P45984 424 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 GNPDA1P46926 289 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 DHPSP49366 369 aaPredicted RBP15.81■□□□□ 0.12
SS18-226ENST00000585241 AFF3P51826 1226 aaKnown RBP15.81■□□□□ 0.12
SS18-226ENST00000585241 HK3P52790 923 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 PPARDQ03181 441 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 SP140Q13342 867 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 PLA2G4EQ3MJ16 856 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 C16orf46Q6P387 395 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 ADAMTSL2Q86TH1 951 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 CFAP206Q8IYR0 622 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 ANKRD42Q8N9B4 389 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 RDH11Q8TC12 318 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 TSACCQ96A04 125 aaPredicted RBP15.81■□□□□ 0.12
SS18-226ENST00000585241 ATOH8Q96SQ7 321 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 OR52A5Q9H2C5 316 aa15.81■□□□□ 0.12
SS18-226ENST00000585241 SUSD2Q9UGT4 822 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms