RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 SGF29Q96ES7 293 aa14.78□□□□□ -0.04
CDK5RAP3-236ENST00000584991 ACOX2Q99424 681 aa14.78□□□□□ -0.04
CDK5RAP3-236ENST00000584991 TFB2MQ9H5Q4 396 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-236ENST00000584991 ARMC1Q9NVT9 282 aa14.78□□□□□ -0.04
CDK5RAP3-236ENST00000584991 POLR3BQ9NW08 1133 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-236ENST00000584991 UBAP1Q9NZ09 502 aa14.78□□□□□ -0.04
CDK5RAP3-236ENST00000584991 C1orf232A0A0U1RR37 186 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 A0A1W2PQ67 120 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 CCDC162PA2VCL2 907 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 E7ENX8 843 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 FBP2O00757 339 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 RNASEH2AO75792 299 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 SRP72O76094 671 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 GOT2P00505 430 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TFAP2AP05549 437 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 CTHP32929 405 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 SMAD2Q15796 467 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 LRRC73Q5JTD7 316 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 GPR153Q6NV75 609 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TXNDC11Q6PKC3 985 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 SPATA6LQ8N4H0 392 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PACRGLQ8N7B6 248 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PNPLA1Q8N8W4 532 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 HMGCLL1Q8TB92 370 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 LRIG1Q96JA1 1093 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 HAUS8Q9BT25 410 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TRIM15Q9C019 465 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 MUC13Q9H3R2 512 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ZFYVE1Q9HBF4 777 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 HEBP1Q9NRV9 189 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PPIL1Q9Y3C6 166 aa14.77□□□□□ -0.05
CDK5RAP3-236ENST00000584991 BPTFQ12830 3046 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 NEMP2A6NFY4 417 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 NPIPB15A6NHN6 443 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 AQP12BA6NM10 295 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 MRASO14807 208 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 MATN4O95460 622 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 CLDN7O95471 211 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 HMGCLP35914 325 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 POLR2LP62875 67 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 FOXM1Q08050 763 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 APOFQ13790 326 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 CDKN3Q16667 212 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 UGT3A2Q3SY77 523 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 POM121L1PQ3SYA9 428 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 IL23RQ5VWK5 629 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 BRAT1Q6PJG6 821 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PAOXQ6QHF9 649 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TSPAN33Q86UF1 283 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 AQP12AQ8IXF9 295 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 MINDY1Q8N5J2 469 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TRPC4APQ8TEL6 797 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ERLEC1Q96DZ1 483 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 C19orf60Q96EN9 201 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 SCRN2Q96FV2 425 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 NDNQ99608 321 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 SYTL2Q9HCH5 934 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TRPV5Q9NQA5 729 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PFDN4Q9NQP4 134 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ACSS2Q9NR19 701 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 INTS10Q9NVR2 710 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 CCDC167Q9P0B6 97 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 IL17CQ9P0M4 197 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 MARCH4Q9P2E8 410 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 FKBPLQ9UIM3 349 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TMCO1Q9UM00 188 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 DMTF1Q9Y222 760 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 SCN8AQ9UQD0 1980 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ANKRD33BA6NCL7 494 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 STX16-NPEPL1H3BU86 382 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 K7EQS6 105 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PDLIM1O00151 329 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 SUPT7LO94864 414 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 EPHX1P07099 455 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 BMP2P12643 396 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 CD1DP15813 335 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PSMA3P25788 255 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 WASP42768 502 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TNFRSF4P43489 277 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PGGT1BP53609 377 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 SEC13P55735 322 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 BNIP2Q12982 314 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 LEXMQ3ZCV2 418 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TMEM259Q4ZIN3 620 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 UNC50Q53HI1 259 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ZNF805Q5CZA5 627 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 ZNF789Q5FWF6 425 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TPRG1Q6ZUI0 275 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 USP45Q70EL2 814 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 EFL1Q7Z2Z2 1120 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 LDB1Q86U70 411 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 OR4L1Q8NH43 312 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 OR8D1Q8WZ84 308 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 LPGAT1Q92604 370 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 EZH1Q92800 747 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 MARK4Q96L34 752 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 LYSMD1Q96S90 227 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 TCF12Q99081 682 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 SUN2Q9UH99 717 aa14.76□□□□□ -0.05
CDK5RAP3-236ENST00000584991 PACSIN3Q9UKS6 424 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms