RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 TMX2-CTNND1H3BSU7 103 aa24.3■■□□□ 1.48
TTC39C-209ENST00000584250 VAPBO95292 243 aa24.3■■□□□ 1.48
TTC39C-209ENST00000584250 F7P08709 466 aaPredicted RBP24.3■■□□□ 1.48
TTC39C-209ENST00000584250 ITGB6P18564 788 aa24.3■■□□□ 1.48
TTC39C-209ENST00000584250 MAGEA3P43357 314 aa24.3■■□□□ 1.48
TTC39C-209ENST00000584250 BRD3Q15059 726 aa24.3■■□□□ 1.48
TTC39C-209ENST00000584250 IGF2-ASQ6U949 168 aa24.3■■□□□ 1.48
TTC39C-209ENST00000584250 AVL9Q8NBF6 648 aa24.3■■□□□ 1.48
TTC39C-209ENST00000584250 SNIP1Q8TAD8 396 aaKnown RBP24.3■■□□□ 1.48
TTC39C-209ENST00000584250 SLCO2A1Q92959 643 aa24.3■■□□□ 1.48
TTC39C-209ENST00000584250 PMEPA1Q969W9 287 aa24.3■■□□□ 1.48
TTC39C-209ENST00000584250 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.3■■□□□ 1.48
TTC39C-209ENST00000584250 NAF1Q96HR8 494 aaKnown RBP24.3■■□□□ 1.48
TTC39C-209ENST00000584250 ASIC3Q9UHC3 531 aa24.3■■□□□ 1.48
TTC39C-209ENST00000584250 IQCF5A8MTL0 148 aa24.29■■□□□ 1.48
TTC39C-209ENST00000584250 AP3B1O00203 1094 aa24.29■■□□□ 1.48
TTC39C-209ENST00000584250 CD3EAPO15446 510 aaKnown RBP24.29■■□□□ 1.48
TTC39C-209ENST00000584250 UBXN7O94888 489 aa24.29■■□□□ 1.48
TTC39C-209ENST00000584250 AP2A2O94973 939 aa24.29■■□□□ 1.48
TTC39C-209ENST00000584250 SLC35G4P0C7Q5 338 aa24.29■■□□□ 1.48
TTC39C-209ENST00000584250 ITPKBP27987 946 aa24.29■■□□□ 1.48
TTC39C-209ENST00000584250 RBMS1P29558 406 aaKnown RBP24.29■■□□□ 1.48
TTC39C-209ENST00000584250 EIF2S3P41091 472 aaKnown RBP24.29■■□□□ 1.48
TTC39C-209ENST00000584250 PPP1CAP62136 330 aa24.29■■□□□ 1.48
TTC39C-209ENST00000584250 WDR74Q6RFH5 385 aaPredicted RBP24.29■■□□□ 1.48
TTC39C-209ENST00000584250 C19orf48Q6RUI8 117 aa24.29■■□□□ 1.48
TTC39C-209ENST00000584250 LSMEM2Q8N112 164 aa24.29■■□□□ 1.48
TTC39C-209ENST00000584250 ZNF578Q96N58 590 aaPredicted RBP24.29■■□□□ 1.48
TTC39C-209ENST00000584250 TRIM51Q9BSJ1 452 aa24.29■■□□□ 1.48
TTC39C-209ENST00000584250 DNALI1O14645 258 aaPredicted RBP24.28■■□□□ 1.48
TTC39C-209ENST00000584250 BANF1O75531 89 aa24.28■■□□□ 1.48
TTC39C-209ENST00000584250 MLNP12872 115 aa24.28■■□□□ 1.48
TTC39C-209ENST00000584250 LEPRP48357 1165 aaKnown RBP24.28■■□□□ 1.48
TTC39C-209ENST00000584250 ARCN1P48444 511 aaKnown RBP24.28■■□□□ 1.48
TTC39C-209ENST00000584250 MRPS25P82663 173 aaKnown RBP24.28■■□□□ 1.48
TTC39C-209ENST00000584250 SARNPP82979 210 aaKnown RBP24.28■■□□□ 1.48
TTC39C-209ENST00000584250 EIF3IQ13347 325 aaKnown RBP24.28■■□□□ 1.48
TTC39C-209ENST00000584250 CASC4Q6P4E1 433 aa24.28■■□□□ 1.48
TTC39C-209ENST00000584250 SYT10Q6XYQ8 523 aa24.28■■□□□ 1.48
TTC39C-209ENST00000584250 PPIL6Q8IXY8 311 aa24.28■■□□□ 1.48
TTC39C-209ENST00000584250 SIGLEC10Q96LC7 697 aa24.28■■□□□ 1.48
TTC39C-209ENST00000584250 XAB2Q9HCS7 855 aaKnown RBP24.28■■□□□ 1.48
TTC39C-209ENST00000584250 OCIAD1Q9NX40 245 aa24.28■■□□□ 1.48
TTC39C-209ENST00000584250 KLHL33A6NCF5 533 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 TTI1O43156 1089 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 KIF1CO43896 1103 aaKnown RBP24.27■■□□□ 1.48
TTC39C-209ENST00000584250 ITGA2BP08514 1039 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 JMJD7P0C870 316 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 FGF3P11487 239 aaPredicted RBP24.27■■□□□ 1.48
TTC39C-209ENST00000584250 AMD1P17707 334 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 MAPK10P53779 464 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 ERVPABLB-1P60509 514 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 ETF1P62495 437 aaKnown RBP24.27■■□□□ 1.48
TTC39C-209ENST00000584250 LYPLAL1Q5VWZ2 237 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 CERS6Q6ZMG9 384 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 ARHGAP22Q7Z5H3 698 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 CLEC14AQ86T13 490 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 JAMLQ86YT9 394 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 KRT222Q8N1A0 295 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 PHC3Q8NDX5 983 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 HNRNPLLQ8WVV9 542 aaKnown RBP24.27■■□□□ 1.48
TTC39C-209ENST00000584250 ELMO1Q92556 727 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 CRELD1Q96HD1 420 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 PWWP2AQ96N64 755 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 CMKLR1Q99788 373 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 THSD1Q9NS62 852 aa24.27■■□□□ 1.48
TTC39C-209ENST00000584250 DSPP15924 2871 aaKnown RBP24.26■■□□□ 1.47
TTC39C-209ENST00000584250 SDR42E2A6NKP2 422 aa24.26■■□□□ 1.47
TTC39C-209ENST00000584250 SLC5A2P31639 672 aa24.26■■□□□ 1.47
TTC39C-209ENST00000584250 CSE1LP55060 971 aaKnown RBP24.26■■□□□ 1.47
TTC39C-209ENST00000584250 ANKRD20A4Q4UJ75 823 aa24.26■■□□□ 1.47
TTC39C-209ENST00000584250 MSS51Q4VC12 460 aa24.26■■□□□ 1.47
TTC39C-209ENST00000584250 IZUMO3Q5VZ72 239 aa24.26■■□□□ 1.47
TTC39C-209ENST00000584250 RBM12BQ8IXT5 1001 aaKnown RBP24.26■■□□□ 1.47
TTC39C-209ENST00000584250 USP7Q93009 1102 aa24.26■■□□□ 1.47
TTC39C-209ENST00000584250 ZNF669Q96BR6 464 aaPredicted RBP24.26■■□□□ 1.47
TTC39C-209ENST00000584250 TGM7Q96PF1 710 aa24.26■■□□□ 1.47
TTC39C-209ENST00000584250 DPYSL5Q9BPU6 564 aa24.26■■□□□ 1.47
TTC39C-209ENST00000584250 FOXJ2Q9P0K8 574 aa24.26■■□□□ 1.47
TTC39C-209ENST00000584250 SLC24A2Q9UI40 661 aa24.26■■□□□ 1.47
TTC39C-209ENST00000584250 ANAPC5Q9UJX4 755 aa24.26■■□□□ 1.47
TTC39C-209ENST00000584250 MN1Q10571 1320 aaPredicted RBP24.26■■□□□ 1.47
TTC39C-209ENST00000584250 A0A087WV48 116 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 SLC5A10A0PJK1 596 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 HGSO14964 777 aaPredicted RBP24.25■■□□□ 1.47
TTC39C-209ENST00000584250 CAPN5O15484 640 aaPredicted RBP24.25■■□□□ 1.47
TTC39C-209ENST00000584250 PRAMEF10O60809 474 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 C9P02748 559 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 OR56A5P0C7T3 313 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 CASQ1P31415 396 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 CCR7P32248 378 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 PAFAH1B1P43034 410 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 CAPZBP47756 277 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 DR1Q01658 176 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 TRA2AQ13595 282 aaKnown RBP eCLIP24.25■■□□□ 1.47
TTC39C-209ENST00000584250 BOP1Q14137 746 aaKnown RBP24.25■■□□□ 1.47
TTC39C-209ENST00000584250 KIAA0930Q6ICG6 404 aaPredicted RBP24.25■■□□□ 1.47
TTC39C-209ENST00000584250 SPNS2Q8IVW8 549 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 OTUD6BQ8N6M0 293 aa24.25■■□□□ 1.47
TTC39C-209ENST00000584250 P2RY12Q9H244 342 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms