RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ZSCAN12O43309 604 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 SEPHS1P49903 392 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 SESN2P58004 480 aaPredicted RBP19.96■□□□□ 0.79
SS18-224ENST00000584083 MANEAQ5SRI9 462 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 FAM92BQ6ZTR7 304 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 NLRP9Q7RTR0 991 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 REXO1L1PQ8IX06 675 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 OR13J1Q8NGT2 312 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 OR6P1Q8NGX9 317 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 ANP32BQ92688 251 aaKnown RBP19.96■□□□□ 0.79
SS18-224ENST00000584083 PBKQ96KB5 322 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 RMDN2Q96LZ7 410 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 UBL7Q96S82 380 aaPredicted RBP19.96■□□□□ 0.79
SS18-224ENST00000584083 TTC1Q99614 292 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 CTRCQ99895 268 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 EIF2B3Q9NR50 452 aaKnown RBP19.96■□□□□ 0.79
SS18-224ENST00000584083 TCAF1Q9Y4C2 921 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 IGSF10Q6WRI0 2623 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 ANKRD34CP0C6C1 535 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 FOXN2P32314 431 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 NSG1P42857 185 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 PRAMEP78395 509 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 ITIH4Q14624 930 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 SOWAHCQ53LP3 525 aaPredicted RBP19.95■□□□□ 0.78
SS18-224ENST00000584083 CACHD1Q5VU97 1274 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 LYPLAL1Q5VWZ2 237 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 CAPRIN2Q6IMN6 1127 aaKnown RBP19.95■□□□□ 0.78
SS18-224ENST00000584083 AFTPHQ6ULP2 937 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 MS4A14Q96JA4 679 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 ZNF778Q96MU6 729 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 COG4Q9H9E3 785 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 FBXO8Q9NRD0 319 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 RIMKLBQ9ULI2 386 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 HEBP2Q9Y5Z4 205 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 COLEC10Q9Y6Z7 277 aa19.95■□□□□ 0.78
SS18-224ENST00000584083 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.94■□□□□ 0.78
SS18-224ENST00000584083 K7ENP7 123 aa19.94■□□□□ 0.78
SS18-224ENST00000584083 TOX3O15405 576 aaPredicted RBP19.94■□□□□ 0.78
SS18-224ENST00000584083 KIF1CO43896 1103 aaKnown RBP19.94■□□□□ 0.78
SS18-224ENST00000584083 AP2A2O94973 939 aa19.94■□□□□ 0.78
SS18-224ENST00000584083 GOT2P00505 430 aaKnown RBP19.94■□□□□ 0.78
SS18-224ENST00000584083 VPS41P49754 854 aa19.94■□□□□ 0.78
SS18-224ENST00000584083 SRSF6Q13247 344 aaKnown RBP19.94■□□□□ 0.78
SS18-224ENST00000584083 TRIP13Q15645 432 aaPredicted RBP19.94■□□□□ 0.78
SS18-224ENST00000584083 KCTD19Q17RG1 926 aaPredicted RBP19.94■□□□□ 0.78
SS18-224ENST00000584083 INO80CQ6PI98 192 aaPredicted RBP19.94■□□□□ 0.78
SS18-224ENST00000584083 XKR5Q6UX68 686 aa19.94■□□□□ 0.78
SS18-224ENST00000584083 CEACAM20Q6UY09 585 aa19.94■□□□□ 0.78
SS18-224ENST00000584083 VASH2Q86V25 355 aa19.94■□□□□ 0.78
SS18-224ENST00000584083 DTX1Q86Y01 620 aa19.94■□□□□ 0.78
SS18-224ENST00000584083 SLC35F6Q8N357 371 aa19.94■□□□□ 0.78
SS18-224ENST00000584083 ZFPM2Q8WW38 1151 aa19.94■□□□□ 0.78
SS18-224ENST00000584083 MAGOHBQ96A72 148 aaKnown RBP19.94■□□□□ 0.78
SS18-224ENST00000584083 TEFMQ96QE5 360 aaKnown RBP19.94■□□□□ 0.78
SS18-224ENST00000584083 AP1M1Q9BXS5 423 aa19.94■□□□□ 0.78
SS18-224ENST00000584083 TRMT1Q9NXH9 659 aaKnown RBP19.94■□□□□ 0.78
SS18-224ENST00000584083 EPHA6Q9UF33 1036 aa19.94■□□□□ 0.78
SS18-224ENST00000584083 TTC7AQ9ULT0 858 aaPredicted RBP19.94■□□□□ 0.78
SS18-224ENST00000584083 EIF4E1BA6NMX2 242 aaKnown RBP19.93■□□□□ 0.78
SS18-224ENST00000584083 AP3B1O00203 1094 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 IFRD1O00458 451 aaPredicted RBP19.93■□□□□ 0.78
SS18-224ENST00000584083 POLR1CO15160 346 aaPredicted RBP19.93■□□□□ 0.78
SS18-224ENST00000584083 GSTM1P09488 218 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 NPY2RP49146 381 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 ATP1A2P50993 1020 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 TERF1P54274 439 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 CRADDP78560 199 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 GSTM4Q03013 218 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 FOXM1Q08050 763 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 PCID2Q5JVF3 399 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 ARMC6Q6NXE6 501 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 RASGEF1CQ8N431 466 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 OR4L1Q8NH43 312 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 BBC3Q96PG8 261 aaPredicted RBP19.93■□□□□ 0.78
SS18-224ENST00000584083 FERD3LQ96RJ6 166 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 NAP1L3Q99457 506 aaPredicted RBP19.93■□□□□ 0.78
SS18-224ENST00000584083 ZPBPQ9BS86 351 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 RAB33BQ9H082 229 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 KCNF1Q9H3M0 494 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 ZNF768Q9H5H4 540 aaKnown RBP19.93■□□□□ 0.78
SS18-224ENST00000584083 KIR3DX1Q9H7L2 352 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 APMAPQ9HDC9 416 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 CHRAC1Q9NRG0 131 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 BFARQ9NZS9 450 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 SLC24A2Q9UI40 661 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 PRSS21Q9Y6M0 314 aa19.93■□□□□ 0.78
SS18-224ENST00000584083 MGAQ8IWI9 3026 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 QSOX1O00391 747 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 EFSO43281 561 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 KIF5CO60282 957 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 FTH1P02794 183 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 NDUFS1P28331 727 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 PREPP48147 710 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 PPP1CAP62136 330 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 ACVR1Q04771 509 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 RPA4Q13156 261 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 FASTKD1Q53R41 847 aaKnown RBP19.92■□□□□ 0.78
SS18-224ENST00000584083 PACS1Q6VY07 963 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 CERS6Q6ZMG9 384 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 PRSS42Q7Z5A4 293 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms