RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 FOXD4L6Q3SYB3 417 aaPredicted RBP6.15□□□□□ -1.42
NUP85-221ENST00000583548 CCDC40Q4G0X9 1142 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 HENMT1Q5T8I9 393 aaKnown RBP6.15□□□□□ -1.42
NUP85-221ENST00000583548 LCE2DQ5TA82 110 aaPredicted RBP6.15□□□□□ -1.42
NUP85-221ENST00000583548 TMEM211Q6ICI0 200 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 PAMR1Q6UXH9 720 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 FOXD4L3Q6VB84 417 aaPredicted RBP6.15□□□□□ -1.42
NUP85-221ENST00000583548 LILRB4Q8NHJ6 448 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 DENND1AQ8TEH3 1009 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 CCDC34Q96HJ3 373 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 COX4I2Q96KJ9 171 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 SARGQ9BW04 601 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 OR2AG1Q9H205 316 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 LIME1Q9H400 295 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 FAM83DQ9H4H8 585 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 WDR54Q9H977 334 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 NPDC1Q9NQX5 325 aaPredicted RBP6.15□□□□□ -1.42
NUP85-221ENST00000583548 FAM207AQ9NSI2 230 aaPredicted RBP6.15□□□□□ -1.42
NUP85-221ENST00000583548 PKD2L2Q9NZM6 624 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 NXT1Q9UKK6 140 aaKnown RBP6.15□□□□□ -1.42
NUP85-221ENST00000583548 MKL2Q9ULH7 1088 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 CNOT6Q9ULM6 557 aaKnown RBP6.15□□□□□ -1.42
NUP85-221ENST00000583548 DNAJC16Q9Y2G8 782 aa6.15□□□□□ -1.42
NUP85-221ENST00000583548 MDC1Q14676 2089 aaKnown RBP6.14□□□□□ -1.43
NUP85-221ENST00000583548 CACNA1CQ13936 2221 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 BECN2A8MW95 431 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 INAFM1C9JVW0 142 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 CRLF1O75462 422 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 OR2B3O76000 313 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 TOXO94900 526 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 HPP00738 406 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 ALBP02768 609 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 CBSLP0DN79 551 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 CTPS1P17812 591 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 CBSP35520 551 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 PAPOLAP51003 745 aaKnown RBP6.14□□□□□ -1.43
NUP85-221ENST00000583548 KPNA2P52292 529 aaKnown RBP6.14□□□□□ -1.43
NUP85-221ENST00000583548 DRG2P55039 364 aaKnown RBP6.14□□□□□ -1.43
NUP85-221ENST00000583548 BPIFB4P59827 614 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 NKX6-1P78426 367 aaPredicted RBP6.14□□□□□ -1.43
NUP85-221ENST00000583548 ALDH6A1Q02252 535 aaKnown RBP6.14□□□□□ -1.43
NUP85-221ENST00000583548 TFF3Q07654 80 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 SYCP1Q15431 976 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 RBBP7Q16576 425 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 NKAIN1Q4KMZ8 207 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 COBLL1Q53SF7 1204 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 ZNF569Q5MCW4 686 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 PDPK2PQ6A1A2 396 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 TRNP1Q6NT89 227 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 TTI2Q6NXR4 508 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 CRTC3Q6UUV7 619 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 KIRREL2Q6UWL6 708 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 C16orf47Q6ZP98 133 aaPredicted RBP6.14□□□□□ -1.43
NUP85-221ENST00000583548 RFLNAQ6ZTI6 216 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 KBTBD2Q8IY47 623 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 GHDCQ8N2G8 530 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 CPSF7Q8N684 471 aaKnown RBP6.14□□□□□ -1.43
NUP85-221ENST00000583548 CCDC185Q8N715 623 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 CCHCR1Q8TD31 782 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 CEP63Q96MT8 703 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 BDH2Q9BUT1 245 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 NAA15Q9BXJ9 866 aaKnown RBP6.14□□□□□ -1.43
NUP85-221ENST00000583548 RASSF1Q9NS23 344 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 LRFN1Q9P244 771 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 SLC23A2Q9UGH3 650 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 POMT2Q9UKY4 750 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 PCDHA7Q9UN72 937 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 CDYLQ9Y232 598 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 HS3ST3B1Q9Y662 390 aa6.14□□□□□ -1.43
NUP85-221ENST00000583548 FLNAP21333 2647 aaKnown RBP6.14□□□□□ -1.43
NUP85-221ENST00000583548 NUP210LQ5VU65 1888 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 A0A0J9YYE9 177 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 OR6C74A6NCV1 312 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 OR5H15A6NDH6 313 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 FAM90A27PA6NNH2 459 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 FADS2P1A8MWK0 482 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 EIF3CLB5ME19 914 aaKnown RBP6.13□□□□□ -1.43
NUP85-221ENST00000583548 FAM227AF5H4B4 570 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 TTI1O43156 1089 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 KLK8O60259 260 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 ALOX12BO75342 701 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 LSM8O95777 96 aaKnown RBP6.13□□□□□ -1.43
NUP85-221ENST00000583548 TRBC1P01850 177 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 CYP11B1P15538 503 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 DESP17661 470 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 HLA-DPA1P20036 260 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 CA4P22748 312 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 NDUFS1P28331 727 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 SOX11P35716 441 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 SPINT3P49223 89 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 TPI1P60174 286 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 TRAF2Q12933 501 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 XRCC4Q13426 336 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 RPE65Q16518 533 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 SLC5A12Q1EHB4 618 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 C15orf59Q2T9L4 293 aaPredicted RBP6.13□□□□□ -1.43
NUP85-221ENST00000583548 CCDC14Q49A88 953 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 ANKRD20A8PQ5CZ79 823 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 PPP1R15BQ5SWA1 713 aa6.13□□□□□ -1.43
NUP85-221ENST00000583548 C1orf189Q5VU69 101 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms