RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 UBXN10Q96LJ8 280 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 VPS11Q9H270 941 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CARS2Q9HA77 564 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CYP4F12Q9HCS2 524 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 MED4Q9NPJ6 270 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 KLQ9UEF7 1012 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ANKRD6Q9Y2G4 727 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GPSM3Q9Y4H4 160 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 DGKBQ9Y6T7 804 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CFAP47Q6ZTR5 3102 aa16.06■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SLC5A10A0PJK1 596 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 KLHL33A6NCF5 533 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 HMGB1P1B2RPK0 211 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GPC4O75487 556 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 COL6A2P12110 1019 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GMPRP36959 345 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SLC26A3P40879 764 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GNPDA1P46926 289 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 NXPH1P58417 271 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PPARDQ03181 441 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GPS2Q13227 327 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GBX1Q14549 363 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TEAD4Q15561 434 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TAF1BQ53T94 588 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ACSBG2Q5FVE4 666 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PLEKHS1Q5SXH7 462 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PEAR1Q5VY43 1037 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 LAYNQ6UX15 382 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 XKR5Q6UX68 686 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 RD3Q7Z3Z2 195 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SYT12Q8IV01 421 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CFAP206Q8IYR0 622 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 C4orf33Q8N1A6 199 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 OXR1Q8N573 874 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 NKAPQ8N5F7 415 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 BANPQ8N9N5 519 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ANKRD49Q8WVL7 239 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ASZ1Q8WWH4 475 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PIGKQ92643 395 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SKA1Q96BD8 255 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ALKBH8Q96BT7 664 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PDLIM5Q96HC4 596 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SMC6Q96SB8 1091 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TIMM29Q9BSF4 260 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SLC13A1Q9BZW2 595 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TM7SF3Q9NS93 570 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SUSD2Q9UGT4 822 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 DCDC2Q9UHG0 476 aa16.05■□□□□ 0.16
CDK5RAP3-228ENST00000583363 LIN7AO14910 233 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SLCO2B1O94956 709 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 APOA4P06727 396 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CCDC166P0CW27 439 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ZNF37AP17032 561 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 DGKAP23743 735 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PBLDP30039 288 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 IL2P60568 153 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 IRF9Q00978 393 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 DMPKQ09013 629 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 HSPA14Q0VDF9 509 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 DLG1Q12959 904 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SF3A2Q15428 464 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CCDC6Q16204 474 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TTLL9Q3SXZ7 439 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 HSP90B2PQ58FF3 399 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CYHR1Q6ZMK1 362 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CHST15Q7LFX5 561 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CLEC14AQ86T13 490 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 HID1Q8IV36 788 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CPNE9Q8IYJ1 553 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PLD6Q8N2A8 252 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 HM13Q8TCT9 377 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 EEF1AKMT1Q8WVE0 214 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PDXPQ96GD0 296 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 OR2M4Q96R27 311 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 SSU72Q9NP77 194 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 RXFP3Q9NSD7 469 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 IGSF5Q9NSI5 407 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PCMTD2Q9NV79 361 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 KLF15Q9UIH9 416 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 RUVBL2Q9Y230 463 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CDYLQ9Y232 598 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 PLEKHM1Q9Y4G2 1056 aa16.04■□□□□ 0.16
CDK5RAP3-228ENST00000583363 ATXN2Q99700 1313 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 EIF3FO00303 357 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 FOXD2O60548 495 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 KLHL2O95198 593 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 RASGRP1O95267 797 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 TSPAN12O95859 305 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 GSTA1P08263 222 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 LTA4HP09960 611 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CBSLP0DN79 551 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 BRAFP15056 766 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 KCNA4P22459 653 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CRHR1P34998 444 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CBSP35520 551 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 DPP6P42658 865 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CCT5P48643 541 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 CLCNKAP51800 687 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 HK3P52790 923 aa16.03■□□□□ 0.16
CDK5RAP3-228ENST00000583363 C21orf59P57076 290 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms