RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 MED16Q9Y2X0 877 aa21.19■□□□□ 0.98
TSEN54-208ENST00000583173 PCDHB1Q9Y5F3 818 aa21.19■□□□□ 0.98
TSEN54-208ENST00000583173 NTN3O00634 580 aaPredicted RBP21.18■□□□□ 0.98
TSEN54-208ENST00000583173 LIN7AO14910 233 aaPredicted RBP21.18■□□□□ 0.98
TSEN54-208ENST00000583173 PFDN6O15212 129 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 OPA1O60313 960 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 GSTA2P09210 222 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 SSTR1P30872 391 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 MPP1Q00013 466 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 CDCP2Q5VXM1 449 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 ZNF449Q6P9G9 518 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 CNSTQ6PJW8 725 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 KIAA0408Q6ZU52 694 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 SLC9B2Q86UD5 537 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 PALM2Q8IXS6 379 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 KRT222Q8N1A0 295 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 OTUD6BQ8N6M0 293 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 SPDYE1Q8NFV5 336 aaPredicted RBP21.18■□□□□ 0.98
TSEN54-208ENST00000583173 IFT81Q8WYA0 676 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 CCDC3Q9BQI4 270 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 WWP1Q9H0M0 922 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 UCK1Q9HA47 277 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 LRRC4CQ9HCJ2 640 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 GNPTGQ9UJJ9 305 aa21.18■□□□□ 0.98
TSEN54-208ENST00000583173 PRAMEF33A0A0G2JMD5 474 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 OR52A4PA6NMU1 304 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 PDZK1P1A8MUH7 402 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 F8W8V4 182 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 TRIM16O95361 564 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 RHOXF2BP0C7M4 288 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 PKMP14618 531 aaKnown RBP21.17■□□□□ 0.98
TSEN54-208ENST00000583173 ACADLP28330 430 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 GPR3P46089 330 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 CD151P48509 253 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 EIF3BP55884 814 aaKnown RBP21.17■□□□□ 0.98
TSEN54-208ENST00000583173 TIAL1Q01085 375 aaKnown RBP eCLIP21.17■□□□□ 0.98
TSEN54-208ENST00000583173 INSM1Q01101 510 aaPredicted RBP21.17■□□□□ 0.98
TSEN54-208ENST00000583173 MGAT5Q09328 741 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 SQSTM1Q13501 440 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 CUL1Q13616 776 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 SEPT7Q16181 437 aaKnown RBP21.17■□□□□ 0.98
TSEN54-208ENST00000583173 DHRS13Q6UX07 377 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 NAPRTQ6XQN6 538 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 C3orf62Q6ZUJ4 267 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 IFT20Q8IY31 132 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 CACTIN-AS1Q8N1I8 211 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 C9orf72Q96LT7 481 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 RMDN2Q96LZ7 410 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 RHOXF2Q9BQY4 288 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 MCMBPQ9BTE3 642 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 SLC40A1Q9NP59 571 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 SMYD2Q9NRG4 433 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 GALPQ9UBC7 116 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 PSMD13Q9UNM6 376 aa21.17■□□□□ 0.98
TSEN54-208ENST00000583173 A0A1W2PQM1 296 aa21.16■□□□□ 0.98
TSEN54-208ENST00000583173 UBA6A0AVT1 1052 aaPredicted RBP21.16■□□□□ 0.98
TSEN54-208ENST00000583173 FAM221BA6H8Z2 402 aa21.16■□□□□ 0.98
TSEN54-208ENST00000583173 H3BMM5 538 aa21.16■□□□□ 0.98
TSEN54-208ENST00000583173 SLCO2B1O94956 709 aa21.16■□□□□ 0.98
TSEN54-208ENST00000583173 ITGB6P18564 788 aa21.16■□□□□ 0.98
TSEN54-208ENST00000583173 PREPP48147 710 aa21.16■□□□□ 0.98
TSEN54-208ENST00000583173 CCL7P80098 99 aa21.16■□□□□ 0.98
TSEN54-208ENST00000583173 PLOD1Q02809 727 aaPredicted RBP21.16■□□□□ 0.98
TSEN54-208ENST00000583173 HHEXQ03014 270 aa21.16■□□□□ 0.98
TSEN54-208ENST00000583173 GBX1Q14549 363 aa21.16■□□□□ 0.98
TSEN54-208ENST00000583173 PTRHD1Q6GMV3 140 aaKnown RBP21.16■□□□□ 0.98
TSEN54-208ENST00000583173 ERMP1Q7Z2K6 904 aa21.16■□□□□ 0.98
TSEN54-208ENST00000583173 ELMO1Q92556 727 aa21.16■□□□□ 0.98
TSEN54-208ENST00000583173 SLC17A6Q9P2U8 582 aa21.16■□□□□ 0.98
TSEN54-208ENST00000583173 KNTC1P50748 2209 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 RHPN2P1A8MT19 583 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 OR1D5P58170 312 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 TMPRSS7Q7RTY8 843 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 SPRED1Q7Z699 444 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 CCDC25Q86WR0 208 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 VRK3Q8IV63 474 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 CHCHD4Q8N4Q1 142 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 AVL9Q8NBF6 648 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 SH3KBP1Q96B97 665 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 PANX3Q96QZ0 392 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 TSPYL1Q9H0U9 437 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 LRRN3Q9H3W5 708 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 KLHL42Q9P2K6 505 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 FAM8A1Q9UBU6 413 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 PSAT1Q9Y617 370 aa21.15■□□□□ 0.98
TSEN54-208ENST00000583173 TCRBV9S1A1TA0A576 114 aa21.14■□□□□ 0.97
TSEN54-208ENST00000583173 FAM159BA6NKW6 160 aa21.14■□□□□ 0.97
TSEN54-208ENST00000583173 CXorf49A8MYA2 514 aaPredicted RBP21.14■□□□□ 0.97
TSEN54-208ENST00000583173 NIPSNAP2O75323 286 aa21.14■□□□□ 0.97
TSEN54-208ENST00000583173 TOP3BO95985 862 aaKnown RBP21.14■□□□□ 0.97
TSEN54-208ENST00000583173 ADRB1P08588 477 aa21.14■□□□□ 0.97
TSEN54-208ENST00000583173 MTHFD1P11586 935 aaKnown RBP21.14■□□□□ 0.97
TSEN54-208ENST00000583173 CD1CP29017 333 aa21.14■□□□□ 0.97
TSEN54-208ENST00000583173 HALP42357 657 aa21.14■□□□□ 0.97
TSEN54-208ENST00000583173 CLCN7P51798 805 aa21.14■□□□□ 0.97
TSEN54-208ENST00000583173 CFHR1Q03591 330 aa21.14■□□□□ 0.97
TSEN54-208ENST00000583173 TMEM26Q6ZUK4 368 aa21.14■□□□□ 0.97
TSEN54-208ENST00000583173 SLC22A15Q8IZD6 547 aa21.14■□□□□ 0.97
TSEN54-208ENST00000583173 Q8N9G6 341 aaPredicted RBP21.14■□□□□ 0.97
TSEN54-208ENST00000583173 EIF1ADQ8N9N8 165 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms