RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 C12orf66Q96MD2 445 aa15.74■□□□□ 0.11
SREBF1-221ENST00000583080 SLC29A3Q9BZD2 475 aa15.74■□□□□ 0.11
SREBF1-221ENST00000583080 LATS2Q9NRM7 1088 aa15.74■□□□□ 0.11
SREBF1-221ENST00000583080 IL17CQ9P0M4 197 aa15.74■□□□□ 0.11
SREBF1-221ENST00000583080 UVRAGQ9P2Y5 699 aa15.74■□□□□ 0.11
SREBF1-221ENST00000583080 GLYATL1P3A0A0U1RQE8 302 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 ZNF487B1APH4 448 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 PPP1R12AO14974 1030 aaPredicted RBP15.73■□□□□ 0.11
SREBF1-221ENST00000583080 LDLRP01130 860 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 KLK3P07288 261 aaPredicted RBP15.73■□□□□ 0.11
SREBF1-221ENST00000583080 RAB40ALP0C0E4 278 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 VAV2P52735 878 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 WNT3AP56704 352 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 ZBED6P86452 979 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 NR6A1Q15406 480 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 PTCHD3Q3KNS1 767 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 TEX44Q53QW1 395 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 SIRPB2Q5JXA9 342 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 TMTC4Q5T4D3 741 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 METRNLQ641Q3 311 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 ARMC6Q6NXE6 501 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 SYTL1Q8IYJ3 562 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 OR1L3Q8NH93 324 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 CPT1BQ92523 772 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 RMDN2Q96LZ7 410 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 TEKT5Q96M29 485 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 GBP4Q96PP9 640 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 SRPK1Q96SB4 655 aaKnown RBP15.73■□□□□ 0.11
SREBF1-221ENST00000583080 NRTNQ99748 197 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 NLNQ9BYT8 704 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 XPO4Q9C0E2 1151 aaKnown RBP15.73■□□□□ 0.11
SREBF1-221ENST00000583080 KIR3DX1Q9H7L2 352 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 PCMTD2Q9NV79 361 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 GPR83Q9NYM4 423 aa15.73■□□□□ 0.11
SREBF1-221ENST00000583080 LOC285095A0A1B0GVY8 99 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 WIPF3A6NGB9 483 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 SLC9B1P1A6NJY1 282 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 ENO4A6NNW6 628 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 TMEM150CB9EJG8 249 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 KRT1P04264 644 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 H2AFZP0C0S5 128 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 POLR2CP19387 275 aaPredicted RBP15.72■□□□□ 0.11
SREBF1-221ENST00000583080 NFKB1P19838 968 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 HLA-DPA1P20036 260 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 AKT1P31749 480 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 MESDQ14696 234 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 PTPRCAPQ14761 206 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 IQCB1Q15051 598 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 PRKD1Q15139 912 aaPredicted RBP15.72■□□□□ 0.11
SREBF1-221ENST00000583080 H2AFVQ71UI9 128 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 GLT6D1Q7Z4J2 308 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 RFX6Q8HWS3 928 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 LILRA3Q8N6C8 439 aaPredicted RBP15.72■□□□□ 0.11
SREBF1-221ENST00000583080 GLIS1Q8NBF1 620 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 DTX3LQ8TDB6 740 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 BLOC1S5Q8TDH9 187 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 SNRNP40Q96DI7 357 aaKnown RBP15.72■□□□□ 0.11
SREBF1-221ENST00000583080 CLIP3Q96DZ5 547 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 MRGPRX2Q96LB1 330 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 SMAD5Q99717 465 aaKnown RBP15.72■□□□□ 0.11
SREBF1-221ENST00000583080 TRABDQ9H4I3 376 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 FAM153AQ9UHL3 310 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 POMT2Q9UKY4 750 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 CAPN11Q9UMQ6 739 aa15.72■□□□□ 0.11
SREBF1-221ENST00000583080 DNMT3AQ9Y6K1 912 aaPredicted RBP15.72■□□□□ 0.11
SREBF1-221ENST00000583080 FER1L5A0AVI2 2057 aa15.71■□□□□ 0.11
SREBF1-221ENST00000583080 ABCA12Q86UK0 2595 aa15.71■□□□□ 0.11
SREBF1-221ENST00000583080 GYPCP04921 128 aa15.71■□□□□ 0.11
SREBF1-221ENST00000583080 CDH3P22223 829 aa15.71■□□□□ 0.11
SREBF1-221ENST00000583080 WASHC5Q12768 1159 aa15.71■□□□□ 0.11
SREBF1-221ENST00000583080 NCF4Q15080 339 aa15.71■□□□□ 0.11
SREBF1-221ENST00000583080 PLEKHN1Q494U1 663 aaPredicted RBP15.71■□□□□ 0.11
SREBF1-221ENST00000583080 ZDHHC20Q5W0Z9 365 aa15.71■□□□□ 0.11
SREBF1-221ENST00000583080 DAAM2Q86T65 1068 aa15.71■□□□□ 0.11
SREBF1-221ENST00000583080 CARFQ8N187 725 aa15.71■□□□□ 0.11
SREBF1-221ENST00000583080 TMEM102Q8N9M5 508 aaPredicted RBP15.71■□□□□ 0.11
SREBF1-221ENST00000583080 OR4E2Q8NGC2 313 aa15.71■□□□□ 0.11
SREBF1-221ENST00000583080 CTNNBL1Q8WYA6 563 aaPredicted RBP15.71■□□□□ 0.11
SREBF1-221ENST00000583080 RNF25Q96BH1 459 aaPredicted RBP15.71■□□□□ 0.11
SREBF1-221ENST00000583080 OXNAD1Q96HP4 312 aaPredicted RBP15.71■□□□□ 0.11
SREBF1-221ENST00000583080 ACTR5Q9H9F9 607 aaPredicted RBP15.71■□□□□ 0.11
SREBF1-221ENST00000583080 FANCEQ9HB96 536 aa15.71■□□□□ 0.11
SREBF1-221ENST00000583080 ASF1BQ9NVP2 202 aa15.71■□□□□ 0.11
SREBF1-221ENST00000583080 SMOXQ9NWM0 555 aa15.71■□□□□ 0.11
SREBF1-221ENST00000583080 SAE1Q9UBE0 346 aaPredicted RBP15.71■□□□□ 0.11
SREBF1-221ENST00000583080 G3BP2Q9UN86 482 aaKnown RBP15.71■□□□□ 0.11
SREBF1-221ENST00000583080 TEP1Q99973 2627 aaKnown RBP15.7■□□□□ 0.1
SREBF1-221ENST00000583080 CELSR2Q9HCU4 2923 aa15.7■□□□□ 0.1
SREBF1-221ENST00000583080 MGAT4DA6NG13 374 aa15.7■□□□□ 0.1
SREBF1-221ENST00000583080 PRAMEF1O95521 474 aa15.7■□□□□ 0.1
SREBF1-221ENST00000583080 MBD3O95983 291 aa15.7■□□□□ 0.1
SREBF1-221ENST00000583080 SLC35G4P0C7Q5 338 aa15.7■□□□□ 0.1
SREBF1-221ENST00000583080 PECAM1P16284 738 aaPredicted RBP15.7■□□□□ 0.1
SREBF1-221ENST00000583080 MSH3P20585 1137 aa15.7■□□□□ 0.1
SREBF1-221ENST00000583080 LMAN1P49257 510 aa15.7■□□□□ 0.1
SREBF1-221ENST00000583080 FANCCQ00597 558 aa15.7■□□□□ 0.1
SREBF1-221ENST00000583080 ITGA9Q13797 1035 aa15.7■□□□□ 0.1
SREBF1-221ENST00000583080 KYNUQ16719 465 aa15.7■□□□□ 0.1
SREBF1-221ENST00000583080 LONRF2Q1L5Z9 754 aa15.7■□□□□ 0.1
SREBF1-221ENST00000583080 MED25Q71SY5 747 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms