RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 PLCL1Q15111 1095 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 KIF26BQ2KJY2 2108 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 DUS1LQ6P1R4 473 aaKnown RBP12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 SYT10Q6XYQ8 523 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 LDB1Q86U70 411 aaPredicted RBP12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 JAMLQ86YT9 394 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 NAT8LQ8N9F0 302 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 FGF11Q92914 225 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 SLCO2A1Q92959 643 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 TMEM159Q96B96 161 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 PRR11Q96HE9 360 aaPredicted RBP12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 SGSM3Q96HU1 749 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 RMDN2Q96LZ7 410 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 ZNF578Q96N58 590 aaPredicted RBP12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 RUNDC3BQ96NL0 473 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 SERPINB12Q96P63 405 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 INSM2Q96T92 566 aaPredicted RBP12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 MARCH4Q9P2E8 410 aaPredicted RBP12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 RNF14Q9UBS8 474 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 KLHL3Q9UH77 587 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 EPG5Q9HCE0 2579 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 APC2O95996 2303 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 SDR42E2A6NKP2 422 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 A8MU76 341 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 CCDC188H7C350 402 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 IFRD1O00458 451 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 DNALI1O14645 258 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 GSTM1P09488 218 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 THRAP10827 490 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 ITGB6P18564 788 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 PAMP19021 973 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 ITIH1P19827 911 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 CSTF2P33240 577 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 PREPP48147 710 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 TTPAP49638 278 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 MAPK10P53779 464 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 ERVPABLB-1P60509 514 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 ETF1P62495 437 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 DR1Q01658 176 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 GSTM4Q03013 218 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 BOP1Q14137 746 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 BRD3Q15059 726 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 SYTL3Q4VX76 610 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 LCE2DQ5TA82 110 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 RNASEH2BQ5TBB1 312 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 IZUMO3Q5VZ72 239 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 WDR74Q6RFH5 385 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 XKR5Q6UX68 686 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 SYDE1Q6ZW31 735 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 PCGF5Q86SE9 256 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 PLXDC1Q8IUK5 500 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 JPH3Q8WXH2 748 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 ELMO1Q92556 727 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 ZNF669Q96BR6 464 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 SLC46A1Q96NT5 459 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 ASCL3Q9NQ33 180 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 OGFRQ9NZT2 677 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 MAD1L1Q9Y6D9 718 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 USP24Q9UPU5 2620 aa12.32□□□□□ -0.44
SMARCE1-218ENST00000582955 ACACAQ13085 2346 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 UBA6A0AVT1 1052 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 MAGEB16A2A368 324 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 GOLGA8KD6RF30 607 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 GOLGA8TH3BQL2 631 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 LIN7AO14910 233 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 HGSO14964 777 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 TTI1O43156 1089 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 RRP8O43159 456 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 NDUFS3O75489 264 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 ITGA2BP08514 1039 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 ARNTP27540 789 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 PDHA2P29803 388 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 MLLT3P42568 568 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 PCBP4P57723 403 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 RPA4Q13156 261 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 DHX34Q14147 1143 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 ARMC3Q5W041 872 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 KIAA0930Q6ICG6 404 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 CAPRIN2Q6IMN6 1127 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 MRNIPQ6NTE8 343 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 IGF2-ASQ6U949 168 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 NAPRTQ6XQN6 538 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 SDCCAG8Q86SQ7 713 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 FAM129CQ86XR2 697 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 AGBL5Q8NDL9 886 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 SNIP1Q8TAD8 396 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 RSC1A1Q92681 617 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 NAF1Q96HR8 494 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 TGM7Q96PF1 710 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 FERD3LQ96RJ6 166 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 KRT12Q99456 494 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 TRIM56Q9BRZ2 755 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 TRIM51Q9BSJ1 452 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 TSSK1BQ9BXA7 367 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 HEBP2Q9Y5Z4 205 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 RPS6KL1Q9Y6S9 549 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 COLEC10Q9Y6Z7 277 aa12.31□□□□□ -0.44
SMARCE1-218ENST00000582955 FAM237BA0A1B0GVD1 139 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 CDRT15L2A8MXV6 281 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 PRMT5O14744 637 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms