RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 HDAC10Q969S8 669 aa19.06■□□□□ 0.64
SREBF1-220ENST00000581707 ZDHHC12Q96GR4 267 aa19.06■□□□□ 0.64
SREBF1-220ENST00000581707 BBC3Q96PG8 261 aaPredicted RBP19.06■□□□□ 0.64
SREBF1-220ENST00000581707 RAB33BQ9H082 229 aa19.06■□□□□ 0.64
SREBF1-220ENST00000581707 FBXO8Q9NRD0 319 aa19.06■□□□□ 0.64
SREBF1-220ENST00000581707 EPHA6Q9UF33 1036 aa19.06■□□□□ 0.64
SREBF1-220ENST00000581707 SLC2A6Q9UGQ3 507 aa19.06■□□□□ 0.64
SREBF1-220ENST00000581707 RIMKLBQ9ULI2 386 aa19.06■□□□□ 0.64
SREBF1-220ENST00000581707 TOX3O15405 576 aaPredicted RBP19.05■□□□□ 0.64
SREBF1-220ENST00000581707 EFSO43281 561 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 RASSF9O75901 435 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 FOXN2P32314 431 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 ITIH4Q14624 930 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 GSE1Q14687 1217 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 PLCL1Q15111 1095 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 MANEAQ5SRI9 462 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 CAPRIN2Q6IMN6 1127 aaKnown RBP19.05■□□□□ 0.64
SREBF1-220ENST00000581707 IRGCQ6NXR0 463 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 CEACAM20Q6UY09 585 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 NLRP9Q7RTR0 991 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 PRELID2Q8N945 189 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 RMDN2Q96LZ7 410 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 TEFMQ96QE5 360 aaKnown RBP19.05■□□□□ 0.64
SREBF1-220ENST00000581707 EIF2B3Q9NR50 452 aaKnown RBP19.05■□□□□ 0.64
SREBF1-220ENST00000581707 TCAF1Q9Y4C2 921 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 HEBP2Q9Y5Z4 205 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 COLEC10Q9Y6Z7 277 aa19.05■□□□□ 0.64
SREBF1-220ENST00000581707 AP2A2O94973 939 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 NSG1P42857 185 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 SEPHS1P49903 392 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 BASP1P80723 227 aaKnown RBP19.04■□□□□ 0.64
SREBF1-220ENST00000581707 KRT33BQ14525 404 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 CACHD1Q5VU97 1274 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 LYPLAL1Q5VWZ2 237 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 DUS1LQ6P1R4 473 aaKnown RBP19.04■□□□□ 0.64
SREBF1-220ENST00000581707 ZNF449Q6P9G9 518 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 FAM92BQ6ZTR7 304 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 VASH2Q86V25 355 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 REXO1L1PQ8IX06 675 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.04■□□□□ 0.64
SREBF1-220ENST00000581707 PBKQ96KB5 322 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 ZNF778Q96MU6 729 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 CTRCQ99895 268 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 ZPBPQ9BS86 351 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 COG4Q9H9E3 785 aa19.04■□□□□ 0.64
SREBF1-220ENST00000581707 POLR1CO15160 346 aaPredicted RBP19.03■□□□□ 0.64
SREBF1-220ENST00000581707 ZSCAN12O43309 604 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 KIF1CO43896 1103 aaKnown RBP19.03■□□□□ 0.64
SREBF1-220ENST00000581707 GOT2P00505 430 aaKnown RBP19.03■□□□□ 0.64
SREBF1-220ENST00000581707 GSTM1P09488 218 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 NDUFS1P28331 727 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 SESN2P58004 480 aaPredicted RBP19.03■□□□□ 0.64
SREBF1-220ENST00000581707 RHDQ02161 417 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 GSTM4Q03013 218 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 ACVR1Q04771 509 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 SRSF6Q13247 344 aaKnown RBP19.03■□□□□ 0.64
SREBF1-220ENST00000581707 ZNF658BQ4V348 819 aaPredicted RBP19.03■□□□□ 0.64
SREBF1-220ENST00000581707 AFTPHQ6ULP2 937 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 PACS1Q6VY07 963 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 PRSS42Q7Z5A4 293 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 RASGEF1CQ8N431 466 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 PPHLN1Q8NEY8 458 aaKnown RBP19.03■□□□□ 0.64
SREBF1-220ENST00000581707 OR6P1Q8NGX9 317 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 OR4L1Q8NH43 312 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 PEX13Q92968 403 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 NKD1Q969G9 470 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 TTC1Q99614 292 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 ZNF768Q9H5H4 540 aaKnown RBP19.03■□□□□ 0.64
SREBF1-220ENST00000581707 KIR3DX1Q9H7L2 352 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 APMAPQ9HDC9 416 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 SIDT1Q9NXL6 827 aaKnown RBP19.03■□□□□ 0.64
SREBF1-220ENST00000581707 SLC24A2Q9UI40 661 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 ATMQ13315 3056 aa19.03■□□□□ 0.64
SREBF1-220ENST00000581707 SMG1Q96Q15 3661 aaKnown RBP19.02■□□□□ 0.64
SREBF1-220ENST00000581707 AP3B1O00203 1094 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 QSOX1O00391 747 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 ATXN7O15265 892 aaPredicted RBP19.02■□□□□ 0.64
SREBF1-220ENST00000581707 ATP1A2P50993 1020 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 PPP1CAP62136 330 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 PRAMEP78395 509 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 FOXM1Q08050 763 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 RPA4Q13156 261 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 PCID2Q5JVF3 399 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 CERS6Q6ZMG9 384 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 KLHL6Q8WZ60 621 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 SGSM3Q96HU1 749 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 MS4A14Q96JA4 679 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 OR52A5Q9H2C5 316 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 CHRAC1Q9NRG0 131 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 HRASLS2Q9NWW9 162 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 PRSS21Q9Y6M0 314 aa19.02■□□□□ 0.64
SREBF1-220ENST00000581707 OR5K3A6NET4 321 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 EIF4E1BA6NMX2 242 aaKnown RBP19.01■□□□□ 0.63
SREBF1-220ENST00000581707 ERVH48-1M5A8F1 160 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 IFRD1O00458 451 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-220ENST00000581707 FTH1P02794 183 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 PDHA2P29803 388 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 CD151P48509 253 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 NPY2RP49146 381 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 CRADDP78560 199 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms