RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 APPL2Q8NEU8 664 aa4.27□□□□□ -1.73
SMCHD1-204ENST00000581226 SLC22A18Q96BI1 424 aa4.27□□□□□ -1.73
SMCHD1-204ENST00000581226 ERLEC1Q96DZ1 483 aa4.27□□□□□ -1.73
SMCHD1-204ENST00000581226 CDRT15Q96T59 188 aa4.27□□□□□ -1.73
SMCHD1-204ENST00000581226 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
SMCHD1-204ENST00000581226 SPATC1LQ9H0A9 340 aa4.27□□□□□ -1.73
SMCHD1-204ENST00000581226 ZBTB20Q9HC78 741 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-204ENST00000581226 PDE7BQ9NP56 450 aa4.27□□□□□ -1.73
SMCHD1-204ENST00000581226 GIMAP4Q9NUV9 329 aa4.27□□□□□ -1.73
SMCHD1-204ENST00000581226 LOC100509620A0A075B734 347 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 FAM72CH0Y354 149 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 TO15178 435 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 SSX4O60224 188 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 NR3C1P04150 777 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 H1F0P07305 194 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 CKMT2P17540 419 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 TIMP3P35625 211 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 DCTP40126 519 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 SIRPAP78324 504 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 PRKAA1Q13131 559 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 C15orf59Q2T9L4 293 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 FAM72AQ5TYM5 149 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 PLA2G4FQ68DD2 849 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 DHRS7BQ6IAN0 325 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 FAM72DQ6L9T8 149 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 DENND5BQ6ZUT9 1274 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 ANO5Q75V66 913 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 DGLUCYQ7Z3D6 616 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 FAM72BQ86X60 149 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 WDR20Q8TBZ3 569 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 ZNF473Q8WTR7 871 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 DAZLQ92904 295 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 MTERF3Q96E29 417 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 PGLYRP2Q96PD5 576 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 NPAP1Q9NZP6 1156 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 MRPL15Q9P015 296 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 RPS6KA6Q9UK32 745 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 SNX8Q9Y5X2 465 aa4.26□□□□□ -1.73
SMCHD1-204ENST00000581226 ASTN2O75129 1339 aaPredicted RBP4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 PRSS51A0A1B0GVH4 220 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 ELOVL7A1L3X0 281 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 PRR23AA6NEV1 266 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 ERVV-2B6SEH9 535 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 GJA1P17302 382 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 CBLP22681 906 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 MT3P25713 68 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 MATR3P43243 847 aaKnown RBP eCLIP4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 NR2C2P49116 596 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 RPS18P62269 152 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 MFAP5Q13361 173 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 GRAPQ13588 217 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 ZNF628Q5EBL2 1059 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 TECRLQ5HYJ1 363 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 WDR38Q5JTN6 314 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 SFMBT2Q5VUG0 894 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 SLC35E4Q6ICL7 350 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 BRINP3Q76B58 766 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 GPALPP1Q8IXQ4 340 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 CRYBG2Q8N1P7 616 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 SCML4Q8N228 414 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 FBXO39Q8N4B4 442 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 STPG4Q8N801 248 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 L3MBTL4Q8NA19 623 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 PRPF31Q8WWY3 499 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 TM9SF4Q92544 642 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 OR6C1Q96RD1 312 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 PSD2Q9BQI7 771 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 NUDT16L1Q9BRJ7 211 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 C16orf70Q9BSU1 422 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 MMP27Q9H306 513 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 BICC1Q9H694 974 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 TCF19Q9Y242 345 aa4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.25□□□□□ -1.735e-12■□□□□ 8.8
SMCHD1-204ENST00000581226 TCF20Q9UGU0 1960 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-204ENST00000581226 LOC102723996A0A087X1L8 192 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 MED19A0JLT2 244 aaPredicted RBP4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 A6NL46 340 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 DUXAA6NLW8 204 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 MAGEB17A8MXT2 336 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 CIDEAO60543 219 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 PRAMEF11O60813 436 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 CREG1O75629 220 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 BCL10O95999 233 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 GNAZP19086 355 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 EPHA2P29317 976 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 CDKN1AP38936 164 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 HSD17B4P51659 736 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 THOP1P52888 689 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 GFI1BQ5VTD9 330 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 CEACAM20Q6UY09 585 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 OR10V1Q8NGI7 309 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 GRAPLQ8TC17 118 aaPredicted RBP4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 PTPMT1Q8WUK0 201 aaPredicted RBP4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 ZFAND2BQ8WV99 257 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 FBXO17Q96EF6 278 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 NEK1Q96PY6 1258 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 ABHD6Q9BV23 337 aa4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 MOV10L1Q9BXT6 1211 aaKnown RBP4.24□□□□□ -1.73
SMCHD1-204ENST00000581226 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms