RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 CYP4F2P78329 520 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 HSD11B2P80365 405 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 KCNC4Q03721 635 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 FOXM1Q08050 763 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 NFE2L1Q14494 772 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 LLGL1Q15334 1064 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 P3H1Q32P28 736 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 ZNF658BQ4V348 819 aaPredicted RBP14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 DARS2Q6PI48 645 aaKnown RBP14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 ZNF517Q6ZMY9 492 aaPredicted RBP14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 FAM83HQ6ZRV2 1179 aaPredicted RBP14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 OOSP2Q86WS3 158 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 RNF10Q8N5U6 811 aaKnown RBP14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 JPH3Q8WXH2 748 aaPredicted RBP14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 STARD8Q92502 1023 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 DCUN1D1Q96GG9 259 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 COPS8Q99627 209 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 CTRCQ99895 268 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 TBL1YQ9BQ87 522 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 LACRTQ9GZZ8 138 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 LRRC40Q9H9A6 602 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 IMPACTQ9P2X3 320 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 KLHL3Q9UH77 587 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 SLC24A2Q9UI40 661 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 RIMKLBQ9ULI2 386 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 DUSP10Q9Y6W6 482 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 OR2AG2A6NM03 316 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 AGRPO00253 132 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 AP2A2O94973 939 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 ZBTB11O95625 1053 aaPredicted RBP14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 SLC35G4P0C7Q5 338 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 ATP1B2P14415 290 aaPredicted RBP14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 STIP1P31948 543 aaKnown RBP14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 TUBB4BP68371 445 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 LAMB3Q13751 1172 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 TUBB2AQ13885 445 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 SEPT6Q14141 434 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 FNBP1LQ5T0N5 605 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 SIDT2Q8NBJ9 832 aaKnown RBP14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 GPR150Q8NGU9 434 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 SLC35B2Q8TB61 432 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 STYXQ8WUJ0 223 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 PEX13Q92968 403 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 STAMBPL1Q96FJ0 436 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 INSM2Q96T92 566 aaPredicted RBP14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 TUBB2BQ9BVA1 445 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 CHRNA10Q9GZZ6 450 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 NLE1Q9NVX2 485 aaPredicted RBP14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 WDR70Q9NW82 654 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 ZDHHC3Q9NYG2 299 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 IL17BQ9UHF5 180 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 AMFRQ9UKV5 643 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 RARRES3Q9UL19 164 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 MAST4O15021 2626 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 NAV2Q8IVL1 2488 aa14.15□□□□□ -0.14
SMARCE1-216ENST00000580419 PRRC2CQ9Y520 2896 aaKnown RBP14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 IGHV5-51A0A0C4DH38 117 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 NKX2-8O15522 239 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 KIF1CO43896 1103 aaKnown RBP14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 CDC25BP30305 580 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 CA5AP35218 305 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 SH3BP2P78314 561 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 PLOD1Q02809 727 aaPredicted RBP14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 KIF5AQ12840 1032 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 DNTTIP2Q5QJE6 756 aaKnown RBP14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 FAM182AQ5T1J6 154 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 IRGCQ6NXR0 463 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 ZNF449Q6P9G9 518 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 RAD9BQ6WBX8 426 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 PEX26Q7Z412 305 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 LINC00523Q86TU6 105 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 RASGRP3Q8IV61 690 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 APLFQ8IW19 511 aaPredicted RBP14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 ACVR1CQ8NER5 493 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 CCDC110Q8TBZ0 833 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 SGSM3Q96HU1 749 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 HES6Q96HZ4 224 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 BAG1Q99933 345 aaPredicted RBP14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 TWSG1Q9GZX9 223 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 TFB2MQ9H5Q4 396 aaKnown RBP14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 MVB12BQ9H7P6 319 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 LHX9Q9NQ69 397 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 C1GALT1Q9NS00 363 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 FGF21Q9NSA1 209 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 IMP3Q9NV31 184 aaKnown RBP14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 HRASLS2Q9NWW9 162 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 FKBPLQ9UIM3 349 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 CRLS1Q9UJA2 301 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 TFR2Q9UP52 801 aa14.14□□□□□ -0.15
SMARCE1-216ENST00000580419 COL12A1Q99715 3063 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 HECTD1Q9ULT8 2610 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 MROH6A6NGR9 719 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 GPR39O43194 453 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 BUD23O43709 281 aaKnown RBP14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 KIAA0754O94854 1291 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 AP2A1O95782 977 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 ZNF28P17035 718 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 OAS2P29728 719 aaKnown RBP14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 DLSTP36957 453 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 SEPHS1P49903 392 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms