RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 THRAP10827 490 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 ARSDP51689 593 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 CLCA4Q14CN2 919 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 C16orf72Q14CZ0 275 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 TRIP13Q15645 432 aaPredicted RBP24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 PCID2Q5JVF3 399 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 AFTPHQ6ULP2 937 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 ZFAND4Q86XD8 727 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 RCBTB1Q8NDN9 531 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 HM13Q8TCT9 377 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 COG1Q8WTW3 980 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 USP7Q93009 1102 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 ARHGAP9Q9BRR9 750 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 SLC40A1Q9NP59 571 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 BFARQ9NZS9 450 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 FAM8A1Q9UBU6 413 aa24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 HEMK1Q9Y5R4 338 aaPredicted RBP24.33■■□□□ 1.49
CDC42EP4-205ENST00000580315 CCDC162PA2VCL2 907 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 CYSRT1A8MQ03 144 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 SGTAO43765 313 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 KRT14P02533 472 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 PRSS56P0CW18 603 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 TPSB2P20231 275 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 MPSTP25325 297 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 CSTF2P33240 577 aaKnown RBP eCLIP24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 COILP38432 576 aaPredicted RBP24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 NPY2RP49146 381 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 SESN2P58004 480 aaPredicted RBP24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 SARNPP82979 210 aaKnown RBP24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 ITIH4Q14624 930 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 TPSAB1Q15661 275 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 RPE65Q16518 533 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 DBN1Q16643 649 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 MANEAQ5SRI9 462 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 LYPLAL1Q5VWZ2 237 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 VASH2Q86V25 355 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 PIANPQ8IYJ0 282 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 AGBL5Q8NDL9 886 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 OR13J1Q8NGT2 312 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 NAT14Q8WUY8 206 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 HDAC10Q969S8 669 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 IL22Q9GZX6 179 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 STARD5Q9NSY2 213 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 SMARCAL1Q9NZC9 954 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 TMEM9Q9P0T7 183 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 PCDHGA4Q9Y5G9 962 aa24.32■■□□□ 1.48
CDC42EP4-205ENST00000580315 C17orf113A0A1B0GUU1 675 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 C9orf172C9J069 976 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 QSOX1O00391 747 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 UBXN7O94888 489 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 AP2A2O94973 939 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 SLC35G4P0C7Q5 338 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 AMD1P17707 334 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 NSG1P42857 185 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 MAPK10P53779 464 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 PRAMEP78395 509 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 ACVR1Q04771 509 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 GPS1Q13098 491 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 CYP1B1Q16678 543 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 TTC27Q6P3X3 843 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 ZNF449Q6P9G9 518 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 CCDC137Q6PK04 289 aaKnown RBP24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 DTX1Q86Y01 620 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 PLXDC1Q8IUK5 500 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 CFAP206Q8IYR0 622 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 OR6P1Q8NGX9 317 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 CCM2Q9BSQ5 444 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 WWP1Q9H0M0 922 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 IMP3Q9NV31 184 aaKnown RBP24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 PDP2Q9P2J9 529 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 SLC2A6Q9UGQ3 507 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 PCDHB11Q9Y5F2 797 aa24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 ZFC3H1O60293 1989 aaKnown RBP24.31■■□□□ 1.48
CDC42EP4-205ENST00000580315 NAV2Q8IVL1 2488 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 OR51F1A6NGY5 319 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 USP27XA6NNY8 438 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 GSTM1P09488 218 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 FAM87AP0C7U9 286 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 TCP1P17987 556 aaKnown RBP24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 ITGB6P18564 788 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 FOXN2P32314 431 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 PPARGP37231 505 aaPredicted RBP24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 VPS41P49754 854 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 CSRP3P50461 194 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 GSTM4Q03013 218 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 GPR18Q14330 331 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 SNAP47Q5SQN1 464 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 TMEM164Q5U3C3 297 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 OR4L1Q8NH43 312 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 GRK7Q8WTQ7 553 aa24.3■■□□□ 1.48
CDC42EP4-205ENST00000580315 UBR5O95071 2799 aaPredicted RBP24.29■■□□□ 1.48
CDC42EP4-205ENST00000580315 PHF2O75151 1096 aa24.29■■□□□ 1.48
CDC42EP4-205ENST00000580315 GOT2P00505 430 aaKnown RBP24.29■■□□□ 1.48
CDC42EP4-205ENST00000580315 POLBP06746 335 aa24.29■■□□□ 1.48
CDC42EP4-205ENST00000580315 MTHFD1P11586 935 aaKnown RBP24.29■■□□□ 1.48
CDC42EP4-205ENST00000580315 WT1P19544 449 aaPredicted RBP24.29■■□□□ 1.48
CDC42EP4-205ENST00000580315 GNG11P61952 73 aa24.29■■□□□ 1.48
CDC42EP4-205ENST00000580315 GSE1Q14687 1217 aa24.29■■□□□ 1.48
CDC42EP4-205ENST00000580315 FASTKD1Q53R41 847 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms