RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 NUDT22Q9BRQ3 303 aa21.24■□□□□ 0.99
CDC42EP4-203ENST00000578516 FOXP3Q9BZS1 431 aa21.24■□□□□ 0.99
CDC42EP4-203ENST00000578516 ABCG4Q9H172 646 aa21.24■□□□□ 0.99
CDC42EP4-203ENST00000578516 OR52A5Q9H2C5 316 aa21.24■□□□□ 0.99
CDC42EP4-203ENST00000578516 EPB41L5Q9HCM4 733 aa21.24■□□□□ 0.99
CDC42EP4-203ENST00000578516 SARS2Q9NP81 518 aaKnown RBP21.24■□□□□ 0.99
CDC42EP4-203ENST00000578516 TMEM9Q9P0T7 183 aa21.24■□□□□ 0.99
CDC42EP4-203ENST00000578516 KNTC1P50748 2209 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 KIR2DS5A0A0G2JLQ3 304 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 A0A0G2JNG1 304 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 KIR2DS3K7RE56 304 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 SMAPO00193 183 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 NTN3O00634 580 aaPredicted RBP21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 SLC35G4P0C7Q5 338 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 OR56A5P0C7T3 313 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 E2F1Q01094 437 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 CFHR1Q03591 330 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 TARDBPQ13148 414 aaKnown RBP eCLIP21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 TUBB2AQ13885 445 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 KIR2DS5Q14953 304 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 NR1D2Q14995 579 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 PTRHD1Q6GMV3 140 aaKnown RBP21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 CNSTQ6PJW8 725 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 WASH2PQ6VEQ5 465 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 TRIM48Q8IWZ4 208 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 CXorf40BQ96DE9 158 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 CERS2Q96G23 380 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 BIRC8Q96P09 236 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 TTC1Q99614 292 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 TUBB2BQ9BVA1 445 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 WASH6PQ9NQA3 447 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 ZDHHC18Q9NUE0 388 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 FBXO5Q9UKT4 447 aa21.23■□□□□ 0.99
CDC42EP4-203ENST00000578516 ADAMTS20P59510 1910 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 IGHV1OR21-1A0A087WYE8 117 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 D6RAR5 112 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 CSO75390 466 aaKnown RBP21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 VIPP01282 170 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 FTH1P02794 183 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 MTHFD1P11586 935 aaKnown RBP21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 CARSP49589 748 aaKnown RBP21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 SPIDRQ14159 915 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 GPR18Q14330 331 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 ARMC3Q5W041 872 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 ZNF549Q6P9A3 640 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 SDCCAG8Q86SQ7 713 aaPredicted RBP21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 SLC9B2Q86UD5 537 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 C9orf72Q96LT7 481 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 SLC38A3Q99624 504 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 KCNK4Q9NYG8 393 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 GNPTGQ9UJJ9 305 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 CLCA2Q9UQC9 943 aa21.22■□□□□ 0.99
CDC42EP4-203ENST00000578516 SLC5A10A0PJK1 596 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 KCNJ13O60928 360 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 HOXB3P14651 431 aaPredicted RBP21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 SLC2A4P14672 509 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 JUPP14923 745 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 XRCC1P18887 633 aaPredicted RBP21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 RPS3P23396 243 aaKnown RBP eCLIP21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 MPSTP25325 297 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 GABRB3P28472 473 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 CD1CP29017 333 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 SSTR1P30872 391 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 HALP42357 657 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 PPM1FP49593 454 aaPredicted RBP21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 PGGT1BP53609 377 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 MAP9Q49MG5 647 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 SYTL3Q4VX76 610 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 CAPRIN2Q6IMN6 1127 aaKnown RBP21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 CEP112Q8N8E3 955 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 PHC3Q8NDX5 983 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 OR6C4Q8NGE1 309 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 SEC14L1Q92503 715 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 GFM1Q96RP9 751 aaKnown RBP21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 NDNQ99608 321 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 SLC30A3Q99726 388 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 VPS37BQ9H9H4 285 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 SMYD2Q9NRG4 433 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 OGFRQ9NZT2 677 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 RUVBL2Q9Y230 463 aaKnown RBP21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 CDYLQ9Y232 598 aa21.21■□□□□ 0.99
CDC42EP4-203ENST00000578516 C17orf113A0A1B0GUU1 675 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 A0A1W2PNU3 283 aaPredicted RBP21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 OR5K4A6NMS3 321 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 HAUS5O94927 633 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 TTC4O95801 387 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 RHOXF2BP0C7M4 288 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 PNLIPP16233 465 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 TYRP1P17643 537 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 RBM20Q5T481 1227 aaKnown RBP21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 RBM44Q6ZP01 1051 aaKnown RBP21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 TMEM26Q6ZUK4 368 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 DCBLD1Q8N8Z6 715 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 GIMAP7Q8NHV1 300 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 RSC1A1Q92681 617 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 LRRC39Q96DD0 335 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 ATXN7L3BQ96GX2 97 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 RHOXF2Q9BQY4 288 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 FAM167BQ9BTA0 163 aa21.2■□□□□ 0.98
CDC42EP4-203ENST00000578516 SEMA6CQ9H3T2 930 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms