RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 PAPD4Q6PIY7 484 aaKnown RBP4.38□□□□□ -1.71
CDH8-205ENST00000577730 CDK20Q8IZL9 346 aa4.38□□□□□ -1.71
CDH8-205ENST00000577730 SVBPQ8N300 66 aa4.38□□□□□ -1.71
CDH8-205ENST00000577730 YIPF7Q8N8F6 280 aa4.38□□□□□ -1.71
CDH8-205ENST00000577730 NDNFQ8TB73 568 aa4.38□□□□□ -1.71
CDH8-205ENST00000577730 ZBED3Q96IU2 234 aaPredicted RBP4.38□□□□□ -1.71
CDH8-205ENST00000577730 ZNF512BQ96KM6 892 aaPredicted RBP4.38□□□□□ -1.71
CDH8-205ENST00000577730 GPR63Q9BZJ6 419 aa4.38□□□□□ -1.71
CDH8-205ENST00000577730 MMP28Q9H239 520 aa4.38□□□□□ -1.71
CDH8-205ENST00000577730 MROH8Q9H579 483 aa4.38□□□□□ -1.71
CDH8-205ENST00000577730 CCM2LQ9NUG4 571 aaPredicted RBP4.38□□□□□ -1.71
CDH8-205ENST00000577730 PIH1D1Q9NWS0 290 aaKnown RBP4.38□□□□□ -1.71
CDH8-205ENST00000577730 TMEM181Q9P2C4 612 aa4.38□□□□□ -1.71
CDH8-205ENST00000577730 SRRDQ9UH36 339 aa4.38□□□□□ -1.71
CDH8-205ENST00000577730 ANGPT4Q9Y264 503 aa4.38□□□□□ -1.71
CDH8-205ENST00000577730 DLGAP4Q9Y2H0 992 aa4.38□□□□□ -1.71
CDH8-205ENST00000577730 HOXC11O43248 304 aaPredicted RBP4.37□□□□□ -1.71
CDH8-205ENST00000577730 LYRM1O43325 122 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 BUD23O43709 281 aaKnown RBP4.37□□□□□ -1.71
CDH8-205ENST00000577730 FCER2P06734 321 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 BMP2P12643 396 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 ACOT2P49753 483 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 FMO1Q01740 532 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 CHRNEQ04844 493 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 GAD2Q05329 585 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 LACC1Q8IV20 430 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 SLC41A1Q8IVJ1 513 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 CEP97Q8IW35 865 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 DENND1AQ8TEH3 1009 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 PRR11Q96HE9 360 aaPredicted RBP4.37□□□□□ -1.71
CDH8-205ENST00000577730 CNDP2Q96KP4 475 aaKnown RBP4.37□□□□□ -1.71
CDH8-205ENST00000577730 MRPL4Q9BYD3 311 aaKnown RBP4.37□□□□□ -1.71
CDH8-205ENST00000577730 RBCK1Q9BYM8 510 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 RGCCQ9H4X1 137 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 LIN7BQ9HAP6 207 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 MAP10Q9P2G4 905 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 PCDHGA7Q9Y5G6 932 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 POLR1AO95602 1720 aaPredicted RBP4.37□□□□□ -1.71
CDH8-205ENST00000577730 ITSN2Q9NZM3 1697 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 LRRC7Q96NW7 1537 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 NPIPA7E9PJI5 369 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 NPHS1O60500 1241 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 PRAMEF2O60811 474 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 SCGNO76038 276 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 GCP02774 474 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 LINC00032P0C843 101 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 NPIPA8P0DM63 369 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 CETPP11597 493 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 CTNNB1P35222 781 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 MNDAP41218 407 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 ALDH3B2P48448 385 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 CLCN5P51795 746 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 PLA2G16P53816 162 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 SLC12A3P55017 1021 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 ARF3P61204 181 aaPredicted RBP4.37□□□□□ -1.71
CDH8-205ENST00000577730 ARF1P84077 181 aaKnown RBP4.37□□□□□ -1.71
CDH8-205ENST00000577730 TCP10Q12799 353 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 HLFQ16534 295 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 STXBP5Q5T5C0 1151 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 ANKRD22Q5VYY1 191 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 HIST2H2AA3Q6FI13 130 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 NAPRTQ6XQN6 538 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 USP45Q70EL2 814 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 LINGO2Q7L985 606 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 RELL1Q8IUW5 271 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 ZNF34Q8IZ26 560 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 BEST4Q8NFU0 473 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 CELF1Q92879 486 aaKnown RBP4.37□□□□□ -1.71
CDH8-205ENST00000577730 CNTNAP3BQ96NU0 1288 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 TARS2Q9BW92 718 aaKnown RBP4.37□□□□□ -1.71
CDH8-205ENST00000577730 FN3KQ9H479 309 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 NLKQ9UBE8 527 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 KIAA1257Q9ULG3 409 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 SPIN1Q9Y657 262 aaPredicted RBP4.37□□□□□ -1.71
CDH8-205ENST00000577730 A0A0A0MRY4 1105 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 ZNF705EA8MWA4 302 aaPredicted RBP4.37□□□□□ -1.71
CDH8-205ENST00000577730 ADAMDEC1O15204 470 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 TP73O15350 636 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 PNPP00491 289 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 PRH1P02810 166 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 NR2C2P49116 596 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 ALDH9A1P49189 494 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 EFNA5P52803 228 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 TAS2R40P59535 323 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 MTMR1Q13613 665 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 SPCS2Q15005 226 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 BATFQ16520 125 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 PPP1R3AQ16821 1122 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 LRIT3Q3SXY7 679 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 CBWD6Q4V339 395 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 CBWD3Q5JTY5 395 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 TOR2AQ5JU69 321 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 CBWD5Q5RIA9 395 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 SYT12Q8IV01 421 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 ACBD4Q8NC06 268 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 PSD4Q8NDX1 1056 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 REPS1Q96D71 796 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 ITCHQ96J02 903 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 ZNF597Q96LX8 424 aa4.37□□□□□ -1.71
CDH8-205ENST00000577730 SPATA13Q96N96 652 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms