RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 OR52A5Q9H2C5 316 aa15.35■□□□□ 0.05
NCBP3-207ENST00000577169 IMP3Q9NV31 184 aaKnown RBP15.35■□□□□ 0.05
NCBP3-207ENST00000577169 TMEM9Q9P0T7 183 aa15.35■□□□□ 0.05
NCBP3-207ENST00000577169 SATB2Q9UPW6 733 aa15.35■□□□□ 0.05
NCBP3-207ENST00000577169 FAM169AQ9Y6X4 670 aa15.35■□□□□ 0.05
NCBP3-207ENST00000577169 CCDC187A0A096LP49 1063 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 IGHV5-10-1A0A0J9YXX1 117 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 LILRA5A6NI73 299 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 IQCF5A8MTL0 148 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 F8W8V4 182 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 SMAPO00193 183 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 AGRPO00253 132 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 PRMT5O14744 637 aaPredicted RBP15.34■□□□□ 0.05
NCBP3-207ENST00000577169 USP1O94782 785 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 SEC31AO94979 1220 aaKnown RBP15.34■□□□□ 0.05
NCBP3-207ENST00000577169 TUBB4AP04350 444 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 MTHFD1P11586 935 aaKnown RBP15.34■□□□□ 0.05
NCBP3-207ENST00000577169 TYRP1P17643 537 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 AMD1P17707 334 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 CSF2RBP32927 897 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 PREPP48147 710 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 LSSP48449 732 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 LIMK2P53671 638 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 THOC5Q13769 683 aaKnown RBP15.34■□□□□ 0.05
NCBP3-207ENST00000577169 GPR18Q14330 331 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 DNAJC21Q5F1R6 531 aaKnown RBP15.34■□□□□ 0.05
NCBP3-207ENST00000577169 C3orf38Q5JPI3 329 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 PHF19Q5T6S3 580 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 FOXR1Q6PIV2 292 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 ZNF572Q7Z3I7 529 aaPredicted RBP15.34■□□□□ 0.05
NCBP3-207ENST00000577169 IGDCC3Q8IVU1 814 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 RBM12BQ8IXT5 1001 aaKnown RBP15.34■□□□□ 0.05
NCBP3-207ENST00000577169 KDF1Q8NAX2 398 aaPredicted RBP15.34■□□□□ 0.05
NCBP3-207ENST00000577169 OR4D9Q8NGE8 314 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 PRR11Q96HE9 360 aaPredicted RBP15.34■□□□□ 0.05
NCBP3-207ENST00000577169 RMDN2Q96LZ7 410 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 TCF12Q99081 682 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 DPYSL5Q9BPU6 564 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 ERP44Q9BS26 406 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 STRADBQ9C0K7 418 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 P2RY12Q9H244 342 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 POLR1BQ9H9Y6 1135 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 OGFRQ9NZT2 677 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 KIF26BQ2KJY2 2108 aa15.34■□□□□ 0.05
NCBP3-207ENST00000577169 UBA6A0AVT1 1052 aaPredicted RBP15.33■□□□□ 0.04
NCBP3-207ENST00000577169 SLC5A10A0PJK1 596 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 PMS2P1A4D2B8 440 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 TMEM8BA6NDV4 472 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 LIN7AO14910 233 aaPredicted RBP15.33■□□□□ 0.04
NCBP3-207ENST00000577169 TP73O15350 636 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 DUX1O43812 170 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 UBXN7O94888 489 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 FMO4P31512 558 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 CCR7P32248 378 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 GABREP78334 506 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 CKAP4Q07065 602 aaKnown RBP15.33■□□□□ 0.04
NCBP3-207ENST00000577169 RPA4Q13156 261 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 KRT33BQ14525 404 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 LONRF1Q17RB8 773 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 HP1BP3Q5SSJ5 553 aaPredicted RBP15.33■□□□□ 0.04
NCBP3-207ENST00000577169 PTRHD1Q6GMV3 140 aaKnown RBP15.33■□□□□ 0.04
NCBP3-207ENST00000577169 DUS1LQ6P1R4 473 aaKnown RBP15.33■□□□□ 0.04
NCBP3-207ENST00000577169 WDR74Q6RFH5 385 aaPredicted RBP15.33■□□□□ 0.04
NCBP3-207ENST00000577169 CENPUQ71F23 418 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 RAB11FIP2Q7L804 512 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 PDIK1LQ8N165 341 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 KRT222Q8N1A0 295 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 PHC3Q8NDX5 983 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 WDR36Q8NI36 951 aaKnown RBP15.33■□□□□ 0.04
NCBP3-207ENST00000577169 LKAAEAR1Q8TD35 194 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 JPH3Q8WXH2 748 aaPredicted RBP15.33■□□□□ 0.04
NCBP3-207ENST00000577169 NXPE2Q96DL1 559 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 LIN37Q96GY3 246 aaPredicted RBP15.33■□□□□ 0.04
NCBP3-207ENST00000577169 FERD3LQ96RJ6 166 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 DPH5Q9H2P9 285 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 C20orf96Q9NUD7 363 aaPredicted RBP15.33■□□□□ 0.04
NCBP3-207ENST00000577169 COLEC10Q9Y6Z7 277 aa15.33■□□□□ 0.04
NCBP3-207ENST00000577169 TAF4O00268 1085 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 IFRD1O00458 451 aaPredicted RBP15.32■□□□□ 0.04
NCBP3-207ENST00000577169 PFDN6O15212 129 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 S1PR4O95977 384 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 PGAM1P18669 254 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 OGNP20774 298 aaKnown RBP15.32■□□□□ 0.04
NCBP3-207ENST00000577169 RPS3P23396 243 aaKnown RBP eCLIP15.32■□□□□ 0.04
NCBP3-207ENST00000577169 ELK3P41970 407 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 CD151P48509 253 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 CSE1LP55060 971 aaKnown RBP15.32■□□□□ 0.04
NCBP3-207ENST00000577169 EIF3BP55884 814 aaKnown RBP15.32■□□□□ 0.04
NCBP3-207ENST00000577169 ARL4CP56559 192 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 CTBP1Q13363 440 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 BOP1Q14137 746 aaKnown RBP15.32■□□□□ 0.04
NCBP3-207ENST00000577169 TYSND1Q2T9J0 566 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 ZNF789Q5FWF6 425 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 SNAP47Q5SQN1 464 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 DUPD1Q68J44 220 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 LRRC6Q86X45 466 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 CILP2Q8IUL8 1156 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 DENND6AQ8IWF6 608 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 UNC5BQ8IZJ1 945 aa15.32■□□□□ 0.04
NCBP3-207ENST00000577169 FBXO39Q8N4B4 442 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms