RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 HOXB5P09067 269 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 UROSP10746 265 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 AKR1A1P14550 325 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 IL10P22301 178 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 TCEA1P23193 301 aaKnown RBP5.75□□□□□ -1.49
VPS53-219ENST00000576019 VPS41P49754 854 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 VAV2P52735 878 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 CDH13P55290 713 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 SLC26A5P58743 744 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 STX1BP61266 288 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 SPP2Q13103 211 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 PDK1Q15118 436 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 CNGA3Q16281 694 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 CCDC152Q4G0S7 254 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 SLFN13Q68D06 897 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 LAIR1Q6GTX8 287 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 ZCCHC12Q6PEW1 402 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 KDELC1Q6UW63 502 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 KIRREL2Q6UWL6 708 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 QSOX2Q6ZRP7 698 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 SPATA21Q7Z572 469 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 CARFQ8N187 725 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 TSPAN14Q8NG11 270 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 MYCBPAPQ8TBZ2 947 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 BCAS4Q8TDM0 211 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 ZNF606Q8WXB4 792 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 TEKT1Q969V4 418 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 VPS39Q96JC1 886 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 TMEM68Q96MH6 324 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 SNX18Q96RF0 628 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 LMF1Q96S06 567 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 TASP1Q9H6P5 420 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 ASNSD1Q9NWL6 643 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 TRPM5Q9NZQ8 1165 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 DKK3Q9UBP4 350 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 AMFRQ9UKV5 643 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 AURKCQ9UQB9 309 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 CHKBQ9Y259 395 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 MAU2Q9Y6X3 613 aa5.75□□□□□ -1.49
VPS53-219ENST00000576019 SYNJ2BP-COX16A0A087WUM0 186 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 MAGEB17A8MXT2 336 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 FAM86B1E9PN63 330 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 GPC4O75487 556 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 WNT11O96014 354 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 ADH4P08319 380 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 FAM86B2P0C5J1 330 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 OR52Z1P0C646 297 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 RFPL3SP0C7P2 107 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 CCNA2P20248 432 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 NOVA1P51513 510 aaKnown RBP5.74□□□□□ -1.49
VPS53-219ENST00000576019 TFAP4Q01664 338 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 CFHR1Q03591 330 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 CBWD6Q4V339 395 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 RABL3Q5HYI8 236 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 CBWD3Q5JTY5 395 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 KCNT1Q5JUK3 1230 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 C15orf52Q6ZUT6 534 aaKnown RBP5.74□□□□□ -1.49
VPS53-219ENST00000576019 CEP57Q86XR8 500 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 MFN1Q8IWA4 741 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 D2HGDHQ8N465 521 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 C12orf76Q8N812 135 aaPredicted RBP5.74□□□□□ -1.49
VPS53-219ENST00000576019 OR14L1PQ8NHC6 308 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 CEP76Q8TAP6 659 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 HASPINQ8TF76 798 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 FBXL20Q96IG2 436 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 SIN3AQ96ST3 1273 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 RUFY1Q96T51 708 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 IFT27Q9BW83 186 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 RNF26Q9BY78 433 aaPredicted RBP5.74□□□□□ -1.49
VPS53-219ENST00000576019 ALOXE3Q9BYJ1 711 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 TRPV6Q9H1D0 765 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 HSD3B7Q9H2F3 369 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 BARX2Q9UMQ3 279 aaPredicted RBP5.74□□□□□ -1.49
VPS53-219ENST00000576019 EXOC7Q9UPT5 735 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 DTX4Q9Y2E6 619 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 RPH3AQ9Y2J0 694 aaPredicted RBP5.74□□□□□ -1.49
VPS53-219ENST00000576019 WBP11Q9Y2W2 641 aaKnown RBP5.74□□□□□ -1.49
VPS53-219ENST00000576019 CHST2Q9Y4C5 530 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 CLDN16Q9Y5I7 305 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 NOX1Q9Y5S8 564 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 ATMQ13315 3056 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 FLNCQ14315 2725 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 PATJQ8NI35 1801 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 GRIN2DO15399 1336 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 ATP8B3O60423 1300 aa5.74□□□□□ -1.49
VPS53-219ENST00000576019 USP9YO00507 2555 aaPredicted RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 C1orf226A1L170 272 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 SH3D21A4FU49 640 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 WIPF3A6NGB9 483 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 CGB1A6NKQ9 187 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 CAPN14A8MX76 684 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 TTC34A8MYJ7 566 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 C2CD4DB7Z1M9 353 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 HYAL3O43820 417 aaPredicted RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 B4GALT3O60512 393 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 SEMA7AO75326 666 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 MT-CYBP00156 380 aaPredicted RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 SFPQP23246 707 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS53-219ENST00000576019 FPR3P25089 353 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms