RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 ERVK11-1P61568 191 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 RPS18P62269 152 aaKnown RBP4.37□□□□□ -1.71
CDC27-216ENST00000574304 GNB1P62873 340 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 PLA2G7Q13093 441 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 GCNT6Q5T4J0 391 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 PLD3Q8IV08 490 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 TMEM190Q8WZ59 177 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 DAZLQ92904 295 aaKnown RBP4.37□□□□□ -1.71
CDC27-216ENST00000574304 LRRC59Q96AG4 307 aaKnown RBP4.37□□□□□ -1.71
CDC27-216ENST00000574304 SAT2Q96F10 170 aaPredicted RBP4.37□□□□□ -1.71
CDC27-216ENST00000574304 LRR1Q96L50 414 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 CEP295NLQ96MC4 621 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 TIGD1Q96MW7 591 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 PELI2Q9HAT8 420 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 OLFML3Q9NRN5 406 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 ECHDC1Q9NTX5 307 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 KCNK7Q9Y2U2 307 aa4.37□□□□□ -1.71
CDC27-216ENST00000574304 A6NL46 340 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 PLOD2O00469 737 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 SLC22A2O15244 555 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 CSPG5O95196 566 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 SERPINB2P05120 415 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 LIFP15018 202 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 GNB3P16520 340 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 KRT33BQ14525 404 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 FAM98BQ52LJ0 330 aaKnown RBP4.36□□□□□ -1.71
CDC27-216ENST00000574304 RAB41Q5JT25 222 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 MFSD6Q6ZSS7 791 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 INTS8Q75QN2 995 aaKnown RBP4.36□□□□□ -1.71
CDC27-216ENST00000574304 ZNF248Q8NDW4 579 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 CTCFLQ8NI51 663 aaPredicted RBP4.36□□□□□ -1.71
CDC27-216ENST00000574304 SLC47A1Q96FL8 570 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 FAM81BQ96LP2 452 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 TREX2Q9BQ50 279 aaPredicted RBP4.36□□□□□ -1.71
CDC27-216ENST00000574304 RHNO1Q9BSD3 238 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 MOV10L1Q9BXT6 1211 aaKnown RBP4.36□□□□□ -1.71
CDC27-216ENST00000574304 MAK16Q9BXY0 300 aaKnown RBP4.36□□□□□ -1.71
CDC27-216ENST00000574304 HHATLQ9HCP6 504 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 CHMP1AQ9HD42 196 aaPredicted RBP4.36□□□□□ -1.71
CDC27-216ENST00000574304 COQ3Q9NZJ6 369 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 NPAP1Q9NZP6 1156 aa4.36□□□□□ -1.71
CDC27-216ENST00000574304 SEC63Q9UGP8 760 aaKnown RBP4.36□□□□□ -1.71
CDC27-216ENST00000574304 ZNF215Q9UL58 517 aaPredicted RBP4.36□□□□□ -1.71
CDC27-216ENST00000574304 PRSS51A0A1B0GVH4 220 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 MED19A0JLT2 244 aaPredicted RBP4.35□□□□□ -1.71
CDC27-216ENST00000574304 ELOVL7A1L3X0 281 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 OR6C76A6NM76 312 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 MAGEB17A8MXT2 336 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 B4DLN1 442 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 TO15178 435 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 RNF224P0DH78 156 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 SLC15A1P46059 708 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 MRPL12P52815 198 aaKnown RBP4.35□□□□□ -1.71
CDC27-216ENST00000574304 TMF1P82094 1093 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 MELKQ14680 651 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 KIAA1644Q3SXP7 199 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 DUSP28Q4G0W2 176 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 C14orf177Q52M58 125 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 FBXL22Q6P050 247 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 NOTCH2NLQ7Z3S9 236 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 ADAD2Q8NCV1 583 aaKnown RBP4.35□□□□□ -1.71
CDC27-216ENST00000574304 FAM120BQ96EK7 910 aaKnown RBP4.35□□□□□ -1.71
CDC27-216ENST00000574304 ABHD6Q9BV23 337 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 RTN4RQ9BZR6 473 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 SIX2Q9NPC8 291 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 BLOC1S4Q9NUP1 217 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 SUCLA2Q9P2R7 463 aaPredicted RBP4.35□□□□□ -1.71
CDC27-216ENST00000574304 SLC7A7Q9UM01 511 aa4.35□□□□□ -1.71
CDC27-216ENST00000574304 SPIN1Q9Y657 262 aaPredicted RBP4.35□□□□□ -1.71
CDC27-216ENST00000574304 LNP1A1A4G5 178 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 FSD2A1L4K1 749 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 A6NCN8 305 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 AGAP14A8MT82 685 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 PAPSS1O43252 624 aaPredicted RBP4.34□□□□□ -1.71
CDC27-216ENST00000574304 ACP2P11117 423 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 MAP2K2P36507 400 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 VEGFCP49767 419 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 MC1RQ01726 317 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 CREB5Q02930 508 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 PLEKHS1Q5SXH7 462 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 SH2D5Q6ZV89 423 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 SZRD1Q7Z422 152 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 ISCA2Q86U28 154 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 AACSQ86V21 672 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 WDR20Q8TBZ3 569 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 ERLEC1Q96DZ1 483 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 MTERF3Q96E29 417 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 BARD1Q99728 777 aaKnown RBP4.34□□□□□ -1.71
CDC27-216ENST00000574304 PPIL3Q9H2H8 161 aaKnown RBP4.34□□□□□ -1.71
CDC27-216ENST00000574304 INTS10Q9NVR2 710 aaKnown RBP4.34□□□□□ -1.71
CDC27-216ENST00000574304 C2orf42Q9NWW7 574 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 HACL1Q9UJ83 578 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 PLAGL1Q9UM63 463 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 KCNJ14Q9UNX9 436 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 ASTN2O75129 1339 aaPredicted RBP4.34□□□□□ -1.71
CDC27-216ENST00000574304 ZNF644Q9H582 1327 aaPredicted RBP4.34□□□□□ -1.71
CDC27-216ENST00000574304 KIAA1210Q9ULL0 1709 aa4.34□□□□□ -1.71
CDC27-216ENST00000574304 WDHD1O75717 1129 aaPredicted RBP4.33□□□□□ -1.72
CDC27-216ENST00000574304 PLA2G4BP0C869 781 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms