RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 TBL1YQ9BQ87 522 aa17.68■□□□□ 0.42
CHD3-214ENST00000572579 ZCCHC2Q9C0B9 1178 aaKnown RBP17.68■□□□□ 0.42
CHD3-214ENST00000572579 FAM8A1Q9UBU6 413 aa17.68■□□□□ 0.42
CHD3-214ENST00000572579 SLC24A2Q9UI40 661 aa17.68■□□□□ 0.42
CHD3-214ENST00000572579 AAR2Q9Y312 384 aaKnown RBP17.68■□□□□ 0.42
CHD3-214ENST00000572579 OR5K3A6NET4 321 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 K7EM74 188 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 EBLN1P0CF75 366 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 DLSTP36957 453 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 ARCN1P48444 511 aaKnown RBP17.67■□□□□ 0.42
CHD3-214ENST00000572579 KPNA2P52292 529 aaKnown RBP17.67■□□□□ 0.42
CHD3-214ENST00000572579 NAP1L1P55209 391 aaKnown RBP17.67■□□□□ 0.42
CHD3-214ENST00000572579 KCNC4Q03721 635 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.67■□□□□ 0.42
CHD3-214ENST00000572579 CRTC2Q53ET0 693 aaPredicted RBP17.67■□□□□ 0.42
CHD3-214ENST00000572579 RASGRP3Q8IV61 690 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 PIANPQ8IYJ0 282 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 CFAP206Q8IYR0 622 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 NXPE1Q8N323 547 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 FAM71DQ8N9W8 422 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 ZNF514Q96K75 400 aaPredicted RBP17.67■□□□□ 0.42
CHD3-214ENST00000572579 DNAJC1Q96KC8 554 aaKnown RBP17.67■□□□□ 0.42
CHD3-214ENST00000572579 C12orf66Q96MD2 445 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 CATSPER2Q96P56 530 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 ZNF71Q9NQZ8 489 aaPredicted RBP17.67■□□□□ 0.42
CHD3-214ENST00000572579 HRASLS2Q9NWW9 162 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 ACSL5Q9ULC5 683 aa17.67■□□□□ 0.42
CHD3-214ENST00000572579 HEMK1Q9Y5R4 338 aaPredicted RBP17.67■□□□□ 0.42
CHD3-214ENST00000572579 IGLV3-16A0A075B6K0 115 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 OR6C74A6NCV1 312 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 TJP3O95049 919 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 LAMB3Q13751 1172 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 SKIDA1Q1XH10 827 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 PRAMEF17Q5VTA0 474 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 ATG14Q6ZNE5 492 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 PPP1R3BQ86XI6 285 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 SLC38A9Q8NBW4 561 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 UBXN4Q92575 508 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 CALR3Q96L12 384 aaKnown RBP17.66■□□□□ 0.42
CHD3-214ENST00000572579 DESI2Q9BSY9 194 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 EFHD1Q9BUP0 239 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 CLMPQ9H6B4 373 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 KIR3DX1Q9H7L2 352 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 LUC7LQ9NQ29 371 aaKnown RBP17.66■□□□□ 0.42
CHD3-214ENST00000572579 PIH1D1Q9NWS0 290 aaKnown RBP17.66■□□□□ 0.42
CHD3-214ENST00000572579 LNPEPQ9UIQ6 1025 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 TUBD1Q9UJT1 453 aa17.66■□□□□ 0.42
CHD3-214ENST00000572579 UBR5O95071 2799 aaPredicted RBP17.65■□□□□ 0.42
CHD3-214ENST00000572579 TRBV5-4A0A0C4DH59 114 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 CRTAMO95727 393 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 FTCDO95954 541 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 NTRK1P04629 796 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 ATP1B2P14415 290 aaPredicted RBP17.65■□□□□ 0.42
CHD3-214ENST00000572579 TCN2P20062 427 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 PDHA2P29803 388 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 PRLHRP49683 370 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 CSRP3P50461 194 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 TUBB3Q13509 450 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 ERV3-1Q14264 604 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 PRPSAP1Q14558 356 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 PARP6Q2NL67 630 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 COLEC12Q5KU26 742 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 FAM199XQ6PEV8 388 aaPredicted RBP17.65■□□□□ 0.42
CHD3-214ENST00000572579 SNX20Q7Z614 316 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 D2HGDHQ8N465 521 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 OR4E2Q8NGC2 313 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 SLC35B2Q8TB61 432 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 CT55Q8WUE5 264 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 APOBEC4Q8WW27 367 aaKnown RBP17.65■□□□□ 0.42
CHD3-214ENST00000572579 ABHD17AQ96GS6 310 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 OR52A5Q9H2C5 316 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 LHX9Q9NQ69 397 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 CRLS1Q9UJA2 301 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 KCNMB2Q9Y691 235 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 PRSS21Q9Y6M0 314 aa17.65■□□□□ 0.42
CHD3-214ENST00000572579 HECTD1Q9ULT8 2610 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 PSMA3P25788 255 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 MC4RP32245 332 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 PLCL1Q15111 1095 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 GPR19Q15760 415 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 DNTTIP2Q5QJE6 756 aaKnown RBP17.64■□□□□ 0.41
CHD3-214ENST00000572579 LCN10Q6JVE6 187 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 TAB3Q8N5C8 712 aaPredicted RBP17.64■□□□□ 0.41
CHD3-214ENST00000572579 CLDN19Q8N6F1 224 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 SIDT2Q8NBJ9 832 aaKnown RBP17.64■□□□□ 0.41
CHD3-214ENST00000572579 PHC3Q8NDX5 983 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 ZFPM2Q8WW38 1151 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 COPS8Q99627 209 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 BAG1Q99933 345 aaPredicted RBP17.64■□□□□ 0.41
CHD3-214ENST00000572579 C19orf43Q9BQ61 176 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 TMEM121Q9BTD3 319 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 AMFRQ9UKV5 643 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 RARRES3Q9UL19 164 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 PADI1Q9ULC6 663 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 PCDHGA6Q9Y5G7 932 aa17.64■□□□□ 0.41
CHD3-214ENST00000572579 TLCD2A6NGC4 264 aa17.63■□□□□ 0.41
CHD3-214ENST00000572579 H7C0S8 307 aa17.63■□□□□ 0.41
CHD3-214ENST00000572579 BTN3A3O00478 584 aa17.63■□□□□ 0.41
CHD3-214ENST00000572579 KATNA1O75449 491 aa17.63■□□□□ 0.41
CHD3-214ENST00000572579 POLR2CP19387 275 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms