RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 B3GNT3Q9Y2A9 372 aa5.51□□□□□ -1.53
SF3B3-214ENST00000572365 NAV3Q8IVL0 2385 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 SPENQ96T58 3664 aaKnown RBP5.5□□□□□ -1.53
SF3B3-214ENST00000572365 TMEM189-UBE2V1I3L0A0 370 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 PPEF2O14830 753 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 KLK10O43240 276 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 FZD7O75084 574 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 JTBO76095 146 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 RHOBTB3O94955 611 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 TPM3P06753 285 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 TNNT1P13805 278 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 CPA1P15085 419 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 MATKP42679 507 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 CCR10P46092 362 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 NT5C2P49902 561 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 ZXDBP98169 803 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 KCNB1Q14721 858 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 MTF1Q14872 753 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 SYCP1Q15431 976 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 SLC39A12Q504Y0 691 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 KDM7AQ6ZMT4 941 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 OTUD6AQ7L8S5 288 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 PPHLN1Q8NEY8 458 aaKnown RBP5.5□□□□□ -1.53
SF3B3-214ENST00000572365 ETNPPLQ8TBG4 499 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 HVCN1Q96D96 273 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 NXPE2Q96DL1 559 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 ZNF845Q96IR2 970 aaPredicted RBP5.5□□□□□ -1.53
SF3B3-214ENST00000572365 HS6ST2Q96MM7 605 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 FYTTD1Q96QD9 318 aaKnown RBP5.5□□□□□ -1.53
SF3B3-214ENST00000572365 GCNAQ96QF7 691 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 SLC26A6Q9BXS9 759 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 ZMYND12Q9H0C1 365 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 RBM28Q9NW13 759 aaKnown RBP5.5□□□□□ -1.53
SF3B3-214ENST00000572365 ADAM21Q9UKJ8 722 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 SIRT4Q9Y6E7 314 aaPredicted RBP5.5□□□□□ -1.53
SF3B3-214ENST00000572365 TLN1Q9Y490 2541 aaKnown RBP5.5□□□□□ -1.53
SF3B3-214ENST00000572365 CELSR1Q9NYQ6 3014 aa5.5□□□□□ -1.53
SF3B3-214ENST00000572365 A0A087X1B8 175 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 ENO4A6NNW6 628 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 MEI4A8MW99 385 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 TARM1B6A8C7 271 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 SYN3O14994 580 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 ZBTB43O43298 467 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 TNFSF14O43557 240 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 SLITRK3O94933 977 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 GNSP15586 552 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 PROZP22891 400 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 ZNF84P51523 738 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 NR1H2P55055 460 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 SLC37A1P57057 533 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 NLRP5P59047 1200 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 YWHAHQ04917 246 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-214ENST00000572365 CDK18Q07002 472 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 GPR17Q13304 367 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 PDGFRLQ15198 375 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 PFKFB3Q16875 520 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-214ENST00000572365 KIF19Q2TAC6 998 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 Q4G0T1 1027 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 HES3Q5TGS1 186 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 TMEM65Q6PI78 240 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 VSTM1Q6UX27 236 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 DSTYKQ6XUX3 929 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 ERICH1Q86X53 443 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 LDLRAD3Q86YD5 345 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 ADGRF3Q8IZF5 1079 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 TMTC2Q8N394 836 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 ENDOVQ8N8Q3 282 aaKnown RBP5.49□□□□□ -1.53
SF3B3-214ENST00000572365 PCYOX1LQ8NBM8 494 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 ADPRHL1Q8NDY3 354 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 MNS1Q8NEH6 495 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 APPL2Q8NEU8 664 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 BEST2Q8NFU1 509 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 RDM1Q8NG50 284 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 ADAMTS18Q8TE60 1221 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 SKA1Q96BD8 255 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 ZNF419Q96HQ0 510 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-214ENST00000572365 ADPGKQ9BRR6 497 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 OGFRQ9NZT2 677 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 DDX25Q9UHL0 483 aaKnown RBP5.49□□□□□ -1.53
SF3B3-214ENST00000572365 CSMD1Q96PZ7 3565 aa5.49□□□□□ -1.53
SF3B3-214ENST00000572365 RP1L1Q8IWN7 2480 aaPredicted RBP5.48□□□□□ -1.53
SF3B3-214ENST00000572365 MYH11P35749 1972 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 PLXNA2O75051 1894 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 KLF18A0A0U1RQI7 1052 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 MYMKA6NI61 221 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 C16orf96A6NNT2 1141 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 KCNJ18B7U540 433 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 APODP05090 189 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 HOXB2P14652 356 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 HMGA1P17096 107 aaKnown RBP5.48□□□□□ -1.53
SF3B3-214ENST00000572365 TNFAIP3P21580 790 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 CDC25CP30307 473 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 PSMC2P35998 433 aaKnown RBP5.48□□□□□ -1.53
SF3B3-214ENST00000572365 BUD31P41223 144 aaPredicted RBP5.48□□□□□ -1.53
SF3B3-214ENST00000572365 TNNT3P45378 269 aaPredicted RBP5.48□□□□□ -1.53
SF3B3-214ENST00000572365 MRPS21P82921 87 aaKnown RBP5.48□□□□□ -1.53
SF3B3-214ENST00000572365 SRSF6Q13247 344 aaKnown RBP5.48□□□□□ -1.53
SF3B3-214ENST00000572365 BYSLQ13895 437 aaKnown RBP5.48□□□□□ -1.53
SF3B3-214ENST00000572365 ZNF77Q15935 545 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 CCDC142Q17RM4 750 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms