RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 CACNG1Q06432 222 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 SEPT6Q14141 434 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 GPR18Q14330 331 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 NAA30Q147X3 362 aaPredicted RBP8.5□□□□□ -1.05
SMG6-210ENST00000572205 TRIP13Q15645 432 aaPredicted RBP8.5□□□□□ -1.05
SMG6-210ENST00000572205 SEPT7Q16181 437 aaKnown RBP8.5□□□□□ -1.05
SMG6-210ENST00000572205 RPE65Q16518 533 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 CLPPQ16740 277 aaPredicted RBP8.5□□□□□ -1.05
SMG6-210ENST00000572205 FNBP1LQ5T0N5 605 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 RNASEH2BQ5TBB1 312 aaKnown RBP8.5□□□□□ -1.05
SMG6-210ENST00000572205 LRRC8BQ6P9F7 803 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 CCDC137Q6PK04 289 aaKnown RBP8.5□□□□□ -1.05
SMG6-210ENST00000572205 TMEM220Q6QAJ8 160 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 TMEM26Q6ZUK4 368 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 ARHGAP22Q7Z5H3 698 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 CCDC89Q8N998 374 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 RCBTB1Q8NDN9 531 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 OR4D9Q8NGE8 314 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 HM13Q8TCT9 377 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 MAIP1Q8WWC4 291 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 ULK4Q96C45 1275 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 GRAMD1AQ96CP6 724 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 MFSD3Q96ES6 412 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 CCDC74BQ96LY2 380 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 SERPINB12Q96P63 405 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 INSM2Q96T92 566 aaPredicted RBP8.5□□□□□ -1.05
SMG6-210ENST00000572205 MENTQ9BUN1 341 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 ZCCHC2Q9C0B9 1178 aaKnown RBP8.5□□□□□ -1.05
SMG6-210ENST00000572205 DDX47Q9H0S4 455 aaKnown RBP8.5□□□□□ -1.05
SMG6-210ENST00000572205 P2RY12Q9H244 342 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 COG4Q9H9E3 785 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 MRM3Q9HC36 420 aaKnown RBP8.5□□□□□ -1.05
SMG6-210ENST00000572205 CHRAC1Q9NRG0 131 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 POT1Q9NUX5 634 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 FOXJ2Q9P0K8 574 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 SEMA5BQ9P283 1151 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 MED16Q9Y2X0 877 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 GCN1Q92616 2671 aaKnown RBP8.49□□□□□ -1.05
SMG6-210ENST00000572205 NUP210LQ5VU65 1888 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 TENM4Q6N022 2769 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 ZCWPW2A0A1B0GU75 182 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 SLC5A10A0PJK1 596 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 KIF5CO60282 957 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 SNX2O60749 519 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 KRT14P02533 472 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 PTMAP06454 111 aaKnown RBP8.49□□□□□ -1.05
SMG6-210ENST00000572205 F7P08709 466 aaPredicted RBP8.49□□□□□ -1.05
SMG6-210ENST00000572205 ANKRD34CP0C6C1 535 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 SPTBP11277 2137 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 MTHFD1P11586 935 aaKnown RBP8.49□□□□□ -1.05
SMG6-210ENST00000572205 CCL4P13236 92 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 ATP1B2P14415 290 aaPredicted RBP8.49□□□□□ -1.05
SMG6-210ENST00000572205 MGAT1P26572 445 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 ITPKBP27987 946 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 PDHA2P29803 388 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 VPS41P49754 854 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 GPLD1P80108 840 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 BASP1P80723 227 aaKnown RBP8.49□□□□□ -1.05
SMG6-210ENST00000572205 CDK16Q00536 496 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 PTK6Q13882 451 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 GBX1Q14549 363 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 ITIH4Q14624 930 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 TYSND1Q2T9J0 566 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 WDR74Q6RFH5 385 aaPredicted RBP8.49□□□□□ -1.05
SMG6-210ENST00000572205 AFTPHQ6ULP2 937 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 LDB1Q86U70 411 aaPredicted RBP8.49□□□□□ -1.05
SMG6-210ENST00000572205 AMZ2Q86W34 360 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 ZNF511Q8NB15 262 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 WDR36Q8NI36 951 aaKnown RBP8.49□□□□□ -1.05
SMG6-210ENST00000572205 WNT2BQ93097 391 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 HDAC10Q969S8 669 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 ZNF514Q96K75 400 aaPredicted RBP8.49□□□□□ -1.05
SMG6-210ENST00000572205 SIGLEC10Q96LC7 697 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 FCRL3Q96P31 734 aaPredicted RBP8.49□□□□□ -1.05
SMG6-210ENST00000572205 COPS8Q99627 209 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 SPRY4Q9C004 299 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 WWP1Q9H0M0 922 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 OSGEPL1Q9H4B0 414 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 HOMER3Q9NSC5 361 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 ZNF358Q9NW07 568 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 PCYOX1Q9UHG3 505 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 CRLS1Q9UJA2 301 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 SOX13Q9UN79 622 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 LOXL2Q9Y4K0 774 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 PCDHGA7Q9Y5G6 932 aa8.49□□□□□ -1.05
SMG6-210ENST00000572205 PCM1Q15154 2024 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 C17orf113A0A1B0GUU1 675 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 OR5K4A6NMS3 321 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 RHPN2P1A8MT19 583 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 PLD2O14939 933 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 HGSO14964 777 aaPredicted RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 NRDCO43847 1150 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 KCNJ13O60928 360 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 FGF3P11487 239 aaPredicted RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 MLNP12872 115 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 TCP1P17987 556 aaKnown RBP8.48□□□□□ -1.05
SMG6-210ENST00000572205 MSH3P20585 1137 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 MPSTP25325 297 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 ACADLP28330 430 aa8.48□□□□□ -1.05
SMG6-210ENST00000572205 ALDH4A1P30038 563 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms