RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 IMP3Q9NV31 184 aaKnown RBP13.12□□□□□ -0.31
RPAIN-207ENST00000570883 BFARQ9NZS9 450 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 ACSL5Q9ULC5 683 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 SPTBP11277 2137 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 C17orf113A0A1B0GUU1 675 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 AP3B1O00203 1094 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 UBXN7O94888 489 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 SLC35G4P0C7Q5 338 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 JMJD7P0C870 316 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 ITPKBP27987 946 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 NSG1P42857 185 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 MAGEA3P43357 314 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 CAPZBP47756 277 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 PPM1FP49593 454 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-207ENST00000570883 PCBP4P57723 403 aaKnown RBP13.11□□□□□ -0.31
RPAIN-207ENST00000570883 C19orf48Q6RUI8 117 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 CES3Q6UWW8 571 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 LDB1Q86U70 411 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-207ENST00000570883 RBM12BQ8IXT5 1001 aaKnown RBP13.11□□□□□ -0.31
RPAIN-207ENST00000570883 AGGF1Q8N302 714 aaeCLIP13.11□□□□□ -0.31
RPAIN-207ENST00000570883 MCUQ8NE86 351 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 SLCO2A1Q92959 643 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 PMEPA1Q969W9 287 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.11□□□□□ -0.31
RPAIN-207ENST00000570883 MFSD3Q96ES6 412 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 C12orf66Q96MD2 445 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 CMKLR1Q99788 373 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 OR52A5Q9H2C5 316 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 EPB41L1Q9H4G0 881 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 MRM3Q9HC36 420 aaKnown RBP13.11□□□□□ -0.31
RPAIN-207ENST00000570883 KCND1Q9NSA2 647 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 PCYOX1Q9UHG3 505 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 SOX13Q9UN79 622 aa13.11□□□□□ -0.31
RPAIN-207ENST00000570883 A8MU76 341 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 C9orf172C9J069 976 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 GOLGA8MH3BSY2 632 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 PRAMEF10O60809 474 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 C9P02748 559 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 FGF3P11487 239 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-207ENST00000570883 PDHA2P29803 388 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 SLC5A2P31639 672 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 PTGIRP43119 386 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 PREPP48147 710 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 LEPRP48357 1165 aaKnown RBP13.1□□□□□ -0.31
RPAIN-207ENST00000570883 PPP1CAP62136 330 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 SNAP47Q5SQN1 464 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 RNASEH2BQ5TBB1 312 aaKnown RBP13.1□□□□□ -0.31
RPAIN-207ENST00000570883 CERS6Q6ZMG9 384 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 ARHGAP22Q7Z5H3 698 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 JAMLQ86YT9 394 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 BMPERQ8N8U9 685 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 NAT8LQ8N9F0 302 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 LKAAEAR1Q8TD35 194 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 GRK7Q8WTQ7 553 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 HNRNPLLQ8WVV9 542 aaKnown RBP13.1□□□□□ -0.31
RPAIN-207ENST00000570883 CRELD1Q96HD1 420 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 NAF1Q96HR8 494 aaKnown RBP13.1□□□□□ -0.31
RPAIN-207ENST00000570883 SERPINB12Q96P63 405 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 VPS37BQ9H9H4 285 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 CATSPERZQ9NTU4 200 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 OCIAD1Q9NX40 245 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 FOXJ2Q9P0K8 574 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 KLHL3Q9UH77 587 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 PCDHGA7Q9Y5G6 932 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 SAR1BQ9Y6B6 198 aa13.1□□□□□ -0.31
RPAIN-207ENST00000570883 CTAGE9A4FU28 777 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 CD3EAPO15446 510 aaKnown RBP13.09□□□□□ -0.31
RPAIN-207ENST00000570883 MLNP12872 115 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 MAPK10P53779 464 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 TLE3Q04726 772 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 PTK6Q13882 451 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 PPP1R7Q15435 360 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 COL28A1Q2UY09 1125 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 FASTKD1Q53R41 847 aaKnown RBP13.09□□□□□ -0.31
RPAIN-207ENST00000570883 LYPLAL1Q5VWZ2 237 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 NAPRTQ6XQN6 538 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 SPACA3Q8IXA5 215 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 AGBL5Q8NDL9 886 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 ZNF248Q8NDW4 579 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 USP7Q93009 1102 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 TGM7Q96PF1 710 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 KIR3DX1Q9H7L2 352 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 XAB2Q9HCS7 855 aaKnown RBP13.09□□□□□ -0.31
RPAIN-207ENST00000570883 SLC24A2Q9UI40 661 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 ACSL6Q9UKU0 697 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 CACNA1GO43497 2377 aa13.09□□□□□ -0.31
RPAIN-207ENST00000570883 GOLGA8KD6RF30 607 aa13.08□□□□□ -0.32
RPAIN-207ENST00000570883 GOLGA8TH3BQL2 631 aa13.08□□□□□ -0.32
RPAIN-207ENST00000570883 NVLO15381 856 aaKnown RBP13.08□□□□□ -0.32
RPAIN-207ENST00000570883 CAPN5O15484 640 aaPredicted RBP13.08□□□□□ -0.32
RPAIN-207ENST00000570883 KIF1CO43896 1103 aaKnown RBP13.08□□□□□ -0.32
RPAIN-207ENST00000570883 VAPBO95292 243 aa13.08□□□□□ -0.32
RPAIN-207ENST00000570883 FTH1P02794 183 aa13.08□□□□□ -0.32
RPAIN-207ENST00000570883 GSTM1P09488 218 aa13.08□□□□□ -0.32
RPAIN-207ENST00000570883 ANKRD34CP0C6C1 535 aa13.08□□□□□ -0.32
RPAIN-207ENST00000570883 AMD1P17707 334 aa13.08□□□□□ -0.32
RPAIN-207ENST00000570883 IVDP26440 423 aa13.08□□□□□ -0.32
RPAIN-207ENST00000570883 CSTF2P33240 577 aaKnown RBP eCLIP13.08□□□□□ -0.32
RPAIN-207ENST00000570883 ARCN1P48444 511 aaKnown RBP13.08□□□□□ -0.32
RPAIN-207ENST00000570883 SARNPP82979 210 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms