RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 CHRNB2P17787 502 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 CA4P22748 312 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 DPYSQ14117 519 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 ERMARDQ5T6L9 678 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 DNAJC24Q6P3W2 148 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 FBXO38Q6PIJ6 1188 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 PHF13Q86YI8 300 aaPredicted RBP17.53■□□□□ 0.4
CLK3-227ENST00000570296 ELOA2Q8IYF1 753 aaPredicted RBP17.53■□□□□ 0.4
CLK3-227ENST00000570296 PPM1MQ96MI6 270 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 FOXC2Q99958 501 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 LHPPQ9H008 270 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 NT5MQ9NPB1 228 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 NDOR1Q9UHB4 597 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 SH3BGRL2Q9UJC5 107 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 CHKBQ9Y259 395 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 PCDHGB6Q9Y5F9 930 aa17.53■□□□□ 0.4
CLK3-227ENST00000570296 NBEAL1Q6ZS30 2694 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 AKAP6Q13023 2319 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 OR6C74A6NCV1 312 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 DDX3YO15523 660 aaKnown RBP17.52■□□□□ 0.4
CLK3-227ENST00000570296 CDK14O94921 469 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 PRLP01236 227 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 UMODP07911 640 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 FOSL1P15407 271 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 CDH3P22223 829 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 MTIF2P46199 727 aaKnown RBP17.52■□□□□ 0.4
CLK3-227ENST00000570296 DCDC1P59894 354 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 RPL7AP62424 266 aaKnown RBP17.52■□□□□ 0.4
CLK3-227ENST00000570296 CSNK1G2P78368 415 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 CDSNQ15517 529 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 PPP6R3Q5H9R7 873 aaPredicted RBP17.52■□□□□ 0.4
CLK3-227ENST00000570296 ISLR2Q6UXK2 745 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 ATPAF2Q8N5M1 289 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 TRAM1L1Q8N609 369 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 CATSPER1Q8NEC5 780 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 LPCAT1Q8NF37 534 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 OR1N1Q8NGS0 311 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 ZFPM2Q8WW38 1151 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 LMF1Q96S06 567 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 SNRNP25Q9BV90 132 aaKnown RBP17.52■□□□□ 0.4
CLK3-227ENST00000570296 NUP85Q9BW27 656 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 STK33Q9BYT3 514 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 POLR1EQ9GZS1 481 aaKnown RBP17.52■□□□□ 0.4
CLK3-227ENST00000570296 GSX1Q9H4S2 264 aaPredicted RBP17.52■□□□□ 0.4
CLK3-227ENST00000570296 SEC14L3Q9UDX4 400 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 POMT2Q9UKY4 750 aa17.52■□□□□ 0.4
CLK3-227ENST00000570296 ATMINO43313 823 aaPredicted RBP17.51■□□□□ 0.39
CLK3-227ENST00000570296 MAP3K7O43318 606 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 CBSLP0DN79 551 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 ESRRAP11474 423 aaPredicted RBP17.51■□□□□ 0.39
CLK3-227ENST00000570296 MTHFD1P11586 935 aaKnown RBP17.51■□□□□ 0.39
CLK3-227ENST00000570296 UCHL3P15374 230 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 CES1P23141 567 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 CBSP35520 551 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 DMPKQ09013 629 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 MFAP5Q13361 173 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 LONRF1Q17RB8 773 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 FAAH2Q6GMR7 532 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 ALG1LQ6GMV1 187 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 MEX3BQ6ZN04 569 aaKnown RBP17.51■□□□□ 0.39
CLK3-227ENST00000570296 TAOK1Q7L7X3 1001 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 TEX26Q8N6G2 289 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 PROKR1Q8TCW9 393 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 AP1M1Q9BXS5 423 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 SEMA3GQ9NS98 782 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 CWC15Q9P013 229 aaKnown RBP17.51■□□□□ 0.39
CLK3-227ENST00000570296 ABI3Q9P2A4 366 aa17.51■□□□□ 0.39
CLK3-227ENST00000570296 IFT80Q9P2H3 777 aaPredicted RBP17.51■□□□□ 0.39
CLK3-227ENST00000570296 NFKBIL1Q9UBC1 381 aaPredicted RBP17.51■□□□□ 0.39
CLK3-227ENST00000570296 MATN2O00339 956 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 CNOT3O75175 753 aaKnown RBP17.5■□□□□ 0.39
CLK3-227ENST00000570296 MTX2O75431 263 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 MMP11P24347 488 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 DCDP81605 110 aaKnown RBP17.5■□□□□ 0.39
CLK3-227ENST00000570296 ITKQ08881 620 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 PRKAA1Q13131 559 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 IHHQ14623 411 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 MAN2A1Q16706 1144 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 ALS2CLQ60I27 953 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 MRPL14Q6P1L8 145 aaKnown RBP17.5■□□□□ 0.39
CLK3-227ENST00000570296 TRAPPC5Q8IUR0 188 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 PSTKQ8IV42 348 aaKnown RBP17.5■□□□□ 0.39
CLK3-227ENST00000570296 GPR135Q8IZ08 494 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 PCDH9Q9HC56 1237 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 DLL4Q9NR61 685 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 RAD18Q9NS91 495 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 RWDD2AQ9UIY3 292 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 ATP6V1DQ9Y5K8 247 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 AP1M2Q9Y6Q5 423 aa17.5■□□□□ 0.39
CLK3-227ENST00000570296 TRAV17A0A0B4J275 112 aa17.49■□□□□ 0.39
CLK3-227ENST00000570296 BHMG1C9JSJ3 638 aaPredicted RBP17.49■□□□□ 0.39
CLK3-227ENST00000570296 CRYABP02511 175 aaKnown RBP17.49■□□□□ 0.39
CLK3-227ENST00000570296 DNAJA1P31689 397 aaKnown RBP17.49■□□□□ 0.39
CLK3-227ENST00000570296 RHBDD2Q6NTF9 364 aa17.49■□□□□ 0.39
CLK3-227ENST00000570296 DCUN1D2Q6PH85 259 aa17.49■□□□□ 0.39
CLK3-227ENST00000570296 MON1BQ7L1V2 547 aa17.49■□□□□ 0.39
CLK3-227ENST00000570296 AMZ2Q86W34 360 aa17.49■□□□□ 0.39
CLK3-227ENST00000570296 CPLX3Q8WVH0 158 aa17.49■□□□□ 0.39
CLK3-227ENST00000570296 PEBP4Q96S96 227 aa17.49■□□□□ 0.39
CLK3-227ENST00000570296 NDC1Q9BTX1 674 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms