RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 TTC4O95801 387 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 VIPP01282 170 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 POLBP06746 335 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 SLC35G4P0C7Q5 338 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 MTHFD1P11586 935 aaKnown RBP9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 OGNP20774 298 aaKnown RBP9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 EPHA4P54764 986 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 ARL4CP56559 192 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 GPLD1P80108 840 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 RPA4Q13156 261 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 CBLBQ13191 982 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 SQSTM1Q13501 440 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 TUBB2AQ13885 445 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 CRYMQ14894 314 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 CLPPQ16740 277 aaPredicted RBP9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 LONRF1Q17RB8 773 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 BBS9Q3SYG4 887 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 AMZ1Q400G9 498 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 MAP9Q49MG5 647 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 RNF187Q5TA31 235 aaPredicted RBP9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 NKAIN2Q5VXU1 208 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 ZNF470Q6ECI4 717 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 CAPRIN2Q6IMN6 1127 aaKnown RBP9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 TMEM26Q6ZUK4 368 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 TMPRSS9Q7Z410 1059 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 B3GNT8Q7Z7M8 397 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 SDCCAG8Q86SQ7 713 aaPredicted RBP9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 LRRC6Q86X45 466 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 CILP2Q8IUL8 1156 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 IGDCC3Q8IVU1 814 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 TRIM48Q8IWZ4 208 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 RBM12BQ8IXT5 1001 aaKnown RBP9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 OTUD6BQ8N6M0 293 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 BBOF1Q8ND07 529 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 ELMO1Q92556 727 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 LPGAT1Q92604 370 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 GRAMD1AQ96CP6 724 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 LRRC39Q96DD0 335 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 CXorf40BQ96DE9 158 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 RMDN2Q96LZ7 410 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 INSM2Q96T92 566 aaPredicted RBP9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 TCF12Q99081 682 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 WDR83Q9BRX9 315 aaKnown RBP9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 TUBB2BQ9BVA1 445 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 TBC1D10AQ9BXI6 508 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 P2RY12Q9H244 342 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 OR52A5Q9H2C5 316 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 DPH5Q9H2P9 285 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 RDH14Q9HBH5 336 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 PLAC1Q9HBJ0 212 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 IMP3Q9NV31 184 aaKnown RBP9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 GRHL1Q9NZI5 618 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 WHRNQ9P202 907 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 UTP11Q9Y3A2 253 aaKnown RBP9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 PCDHB1Q9Y5F3 818 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 ENTPD2Q9Y5L3 495 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 TEX264Q9Y6I9 313 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 FAM169AQ9Y6X4 670 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 CHD8Q9HCK8 2581 aa9.38□□□□□ -0.91
HCCAT5-201ENST00000569990 FRYQ5TBA9 3013 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 UBA6A0AVT1 1052 aaPredicted RBP9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 SLC5A10A0PJK1 596 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 TRABD2BA6NFA1 517 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 IQCF5A8MTL0 148 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 C1QTNF9BB2RNN3 333 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 E7ESA3 106 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 LIN7AO14910 233 aaPredicted RBP9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 PFDN6O15212 129 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 DUX1O43812 170 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 C1QTNF9P0C862 333 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 RPS3P23396 243 aaKnown RBP eCLIP9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 PDHA2P29803 388 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 CCKBRP32239 447 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 CCR7P32248 378 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 CSF2RBP32927 897 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 ELK3P41970 407 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 PREPP48147 710 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 INHBCP55103 352 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 ADARP55265 1226 aaKnown RBP9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 CFHR1Q03591 330 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 ZFP36L1Q07352 338 aaKnown RBP9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 CALCOCO2Q13137 446 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 THOC5Q13769 683 aaKnown RBP9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 GPR18Q14330 331 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 SPANXN3Q5MJ09 141 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 HP1BP3Q5SSJ5 553 aaPredicted RBP9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 PTRHD1Q6GMV3 140 aaKnown RBP9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 DUS1LQ6P1R4 473 aaKnown RBP9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 UNQ6494/PRO21346Q6UXR6 183 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 ZNF574Q6ZN55 896 aaPredicted RBP9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 USP53Q70EK8 1073 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 CENPUQ71F23 418 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 PIM3Q86V86 326 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 SLITRK4Q8IW52 837 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 DENND6AQ8IWF6 608 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 UNC5BQ8IZJ1 945 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 OR10G6Q8NH81 332 aa9.37□□□□□ -0.91
HCCAT5-201ENST00000569990 LKAAEAR1Q8TD35 194 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms