RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 JPH3Q8WXH2 748 aaPredicted RBP12.74□□□□□ -0.37
CNOT1-220ENST00000569916 ART4Q93070 314 aa12.74□□□□□ -0.37
CNOT1-220ENST00000569916 MAGOHBQ96A72 148 aaKnown RBP12.74□□□□□ -0.37
CNOT1-220ENST00000569916 TAAR9Q96RI9 348 aa12.74□□□□□ -0.37
CNOT1-220ENST00000569916 NAP1L3Q99457 506 aaPredicted RBP12.74□□□□□ -0.37
CNOT1-220ENST00000569916 CCM2Q9BSQ5 444 aa12.74□□□□□ -0.37
CNOT1-220ENST00000569916 COG4Q9H9E3 785 aa12.74□□□□□ -0.37
CNOT1-220ENST00000569916 VPS37BQ9H9H4 285 aa12.74□□□□□ -0.37
CNOT1-220ENST00000569916 SNX12Q9UMY4 172 aa12.74□□□□□ -0.37
CNOT1-220ENST00000569916 PCDHGA3Q9Y5H0 932 aa12.74□□□□□ -0.37
CNOT1-220ENST00000569916 PRSS21Q9Y6M0 314 aa12.74□□□□□ -0.37
CNOT1-220ENST00000569916 CES2O00748 559 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 CAPN5O15484 640 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-220ENST00000569916 AP2A2O94973 939 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 KRT14P02533 472 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 LIPCP11150 499 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 COILP38432 576 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-220ENST00000569916 MAGEA6P43360 314 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 VPS41P49754 854 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 UCNP55089 124 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 TMPRSS3P57727 454 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 CRADDP78560 199 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 CDK16Q00536 496 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 GPS1Q13098 491 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 SEMA3AQ14563 771 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 TMEM164Q5U3C3 297 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 BROXQ5VW32 411 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 CCDC137Q6PK04 289 aaKnown RBP12.73□□□□□ -0.37
CNOT1-220ENST00000569916 ZFAND4Q86XD8 727 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 FAM129CQ86XR2 697 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 OR4L1Q8NH43 312 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.73□□□□□ -0.37
CNOT1-220ENST00000569916 SGSM3Q96HU1 749 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 C9orf72Q96LT7 481 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 FCRL3Q96P31 734 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-220ENST00000569916 TGM7Q96PF1 710 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 DDA1Q9BW61 102 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 IL22Q9GZX6 179 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 RAB33BQ9H082 229 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 OR52A5Q9H2C5 316 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 CHRAC1Q9NRG0 131 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 TREX1Q9NSU2 369 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 SIDT1Q9NXL6 827 aaKnown RBP12.73□□□□□ -0.37
CNOT1-220ENST00000569916 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.73□□□□□ -0.37
CNOT1-220ENST00000569916 EPHA6Q9UF33 1036 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 NEU2Q9Y3R4 380 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 ZFYVE26Q68DK2 2539 aa12.73□□□□□ -0.37
CNOT1-220ENST00000569916 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.72□□□□□ -0.37
CNOT1-220ENST00000569916 AP3B1O00203 1094 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 QSOX1O00391 747 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 ZNF185O15231 689 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 TOX3O15405 576 aaPredicted RBP12.72□□□□□ -0.37
CNOT1-220ENST00000569916 OR1I1O60431 355 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 PHF2O75151 1096 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 TMEM63AO94886 807 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 GSTM1P09488 218 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 MGAT1P26572 445 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 CD82P27701 267 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 NMBRP28336 390 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 PDHA2P29803 388 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 PREPP48147 710 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 NPY2RP49146 381 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 TERF1P54274 439 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 PPP1CAP62136 330 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 CXADRP78310 365 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 PRAMEP78395 509 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 GSTM4Q03013 218 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 PLCL1Q15111 1095 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 TGIF1Q15583 401 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 LYPLAL1Q5VWZ2 237 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 ANKRD22Q5VYY1 191 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 ANKS6Q68DC2 871 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 LRRC8BQ6P9F7 803 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 CERS6Q6ZMG9 384 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 PRSS42Q7Z5A4 293 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 DTX1Q86Y01 620 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 OR6P1Q8NGX9 317 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 ZNF768Q9H5H4 540 aaKnown RBP12.72□□□□□ -0.37
CNOT1-220ENST00000569916 KIR3DX1Q9H7L2 352 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 CPNE5Q9HCH3 593 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 SYBUQ9NX95 663 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 SLC39A1Q9NY26 324 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 BFARQ9NZS9 450 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 SLC24A2Q9UI40 661 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 PYCARDQ9ULZ3 195 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 B3GALT1Q9Y5Z6 326 aa12.72□□□□□ -0.37
CNOT1-220ENST00000569916 KIF1CO43896 1103 aaKnown RBP12.71□□□□□ -0.37
CNOT1-220ENST00000569916 FTH1P02794 183 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 FNTAP49354 379 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 RAB15P59190 212 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 MC2RQ01718 297 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 RPA4Q13156 261 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 GSE1Q14687 1217 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 FASTKD1Q53R41 847 aaKnown RBP12.71□□□□□ -0.37
CNOT1-220ENST00000569916 DCAF12Q5T6F0 453 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 IRGCQ6NXR0 463 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 KLHL35Q6PF15 583 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 FAM92BQ6ZTR7 304 aa12.71□□□□□ -0.37
CNOT1-220ENST00000569916 ZFPM2Q8WW38 1151 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms