RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 AGAP3Q96P47 875 aa11.46□□□□□ -0.57
SNAPC5-208ENST00000568875 CINPQ9BW66 212 aaPredicted RBP11.46□□□□□ -0.57
SNAPC5-208ENST00000568875 DRC3Q9H069 523 aa11.46□□□□□ -0.57
SNAPC5-208ENST00000568875 VCX3BQ9H321 246 aa11.46□□□□□ -0.57
SNAPC5-208ENST00000568875 NDE1Q9NXR1 346 aa11.46□□□□□ -0.57
SNAPC5-208ENST00000568875 TLK1Q9UKI8 766 aa11.46□□□□□ -0.57
SNAPC5-208ENST00000568875 RAP2CQ9Y3L5 183 aa11.46□□□□□ -0.57
SNAPC5-208ENST00000568875 F5H423 210 aaPredicted RBP11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 MMP20O60882 483 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 HSPA4LO95757 839 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 CR2P20023 1033 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 GRK6P43250 576 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 ARRB1P49407 418 aaPredicted RBP11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 SCNN1BP51168 640 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 RENBPP51606 427 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 RPL26P61254 145 aaKnown RBP11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 BNIP3Q12983 259 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 ZBTB17Q13105 803 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 TMEM52BQ4KMG9 183 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 CFAP157Q5JU67 520 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 CERCAMQ5T4B2 595 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 BRAT1Q6PJG6 821 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 CES3Q6UWW8 571 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 CMC1Q7Z7K0 106 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 GATAD2AQ86YP4 633 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 PLD6Q8N2A8 252 aaKnown RBP11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 PGBD5Q8N414 524 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 OXR1Q8N573 874 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 OR13H1Q8NG92 308 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 SPDL1Q96EA4 605 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 MFSD3Q96ES6 412 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 AGAP2Q99490 1192 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 IL12RB2Q99665 862 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 ATP13A3Q9H7F0 1226 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 S100A14Q9HCY8 104 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 GPR27Q9NS67 375 aa11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 PIH1D1Q9NWS0 290 aaKnown RBP11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.46□□□□□ -0.58
SNAPC5-208ENST00000568875 TDRD6O60522 2096 aaKnown RBP11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 GOLGA4Q13439 2230 aaKnown RBP11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 SHROOM3Q8TF72 1996 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 MAGEA13PA6NCF6 341 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 MATN2O00339 956 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 HDAC3O15379 428 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 YKT6O15498 198 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 USP12O75317 370 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 JCHAINP01591 159 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 THRAP10827 490 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 ARRB2P32121 409 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 SERPINB5P36952 375 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 SESN3P58005 492 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 BCL2L1Q07817 233 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 PRKAA1Q13131 559 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 LIPMQ5VYY2 423 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 Q6ZSR6 202 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 KANSL1Q7Z3B3 1105 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 SLCO6A1Q86UG4 719 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 ZC3HC1Q86WB0 502 aaKnown RBP11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 DCP2Q8IU60 420 aaKnown RBP11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 KIRREL3Q8IZU9 778 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 SLC22A18ASQ8N1D0 253 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 ATPAF2Q8N5M1 289 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 CPSF7Q8N684 471 aaKnown RBP11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 TEX26Q8N6G2 289 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 DTX3LQ8TDB6 740 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 STYXQ8WUJ0 223 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 GATA6Q92908 595 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 FATE1Q969F0 183 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 CDC6Q99741 560 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 FAM167BQ9BTA0 163 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 COG4Q9H9E3 785 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 PCDH12Q9NPG4 1184 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 CHRAC1Q9NRG0 131 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 TOR4AQ9NXH8 423 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 SCOCQ9UIL1 159 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 PRPF19Q9UMS4 504 aaKnown RBP11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 ANKRD36A6QL64 1941 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 FREM2Q5SZK8 3169 aa11.45□□□□□ -0.58
SNAPC5-208ENST00000568875 TTC24A2A3L6 582 aaPredicted RBP11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 MATN3O15232 486 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 HTRA2O43464 458 aaPredicted RBP11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 DKK1O94907 266 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 COX4I1P13073 169 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 EPHA8P29322 1005 aaPredicted RBP11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 SERPINA4P29622 427 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 KPNA2P52292 529 aaKnown RBP11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 GEMP55040 296 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 AP1S1P61966 158 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 ELP6Q0PNE2 266 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 FOXC1Q12948 553 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 KLF10Q13118 480 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 HERC3Q15034 1050 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 SH2D4BQ5SQS7 431 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 MARC1Q5VT66 337 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 TIGD7Q6NT04 549 aaPredicted RBP11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 ATG14Q6ZNE5 492 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 TMEM151AQ8N4L1 468 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 CNTD1Q8N815 330 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 DENND6BQ8NEG7 585 aa11.44□□□□□ -0.58
SNAPC5-208ENST00000568875 GABPB2Q8TAK5 448 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms