RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 ARHGAP12Q8IWW6 846 aa9.28□□□□□ -0.92
KARS-209ENST00000568378 RAVER1Q8IY67 606 aaKnown RBP9.28□□□□□ -0.92
KARS-209ENST00000568378 FAM71AQ8IYT1 594 aa9.28□□□□□ -0.92
KARS-209ENST00000568378 GPR135Q8IZ08 494 aa9.28□□□□□ -0.92
KARS-209ENST00000568378 PGBD5Q8N414 524 aa9.28□□□□□ -0.92
KARS-209ENST00000568378 NSMCE1Q8WV22 266 aa9.28□□□□□ -0.92
KARS-209ENST00000568378 N4BP2L2Q92802 583 aaPredicted RBP9.28□□□□□ -0.92
KARS-209ENST00000568378 LMF1Q96S06 567 aa9.28□□□□□ -0.92
KARS-209ENST00000568378 WDR24Q96S15 920 aa9.28□□□□□ -0.92
KARS-209ENST00000568378 SPATA16Q9BXB7 569 aa9.28□□□□□ -0.92
KARS-209ENST00000568378 CDYLQ9Y232 598 aa9.28□□□□□ -0.92
KARS-209ENST00000568378 WDR37Q9Y2I8 494 aa9.28□□□□□ -0.92
KARS-209ENST00000568378 MEMO1Q9Y316 297 aa9.28□□□□□ -0.92
KARS-209ENST00000568378 NUP210LQ5VU65 1888 aa9.28□□□□□ -0.92
KARS-209ENST00000568378 COL6A5A8TX70 2615 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 C1orf232A0A0U1RR37 186 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 BICDL2A1A5D9 508 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 K7ELQ4 463 aaPredicted RBP9.27□□□□□ -0.93
KARS-209ENST00000568378 CCP110O43303 1012 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 MMEP08473 750 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 PON1P27169 355 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 PPP1R2P41236 205 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 DCDP81605 110 aaKnown RBP9.27□□□□□ -0.93
KARS-209ENST00000568378 PDAP1Q13442 181 aaKnown RBP9.27□□□□□ -0.93
KARS-209ENST00000568378 PCOLCEQ15113 449 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 RPE65Q16518 533 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 ALS2CLQ60I27 953 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 NCCRP1Q6ZVX7 275 aaPredicted RBP9.27□□□□□ -0.93
KARS-209ENST00000568378 TRAPPC5Q8IUR0 188 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 NPWQ8N729 165 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 CCHCR1Q8TD31 782 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 NELFBQ8WX92 580 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 SMARCE1Q969G3 411 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 SDCCAG3Q96C92 435 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 C11orf70Q9BRQ4 267 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 SELENOOQ9BVL4 669 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 AP1M1Q9BXS5 423 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.27□□□□□ -0.93
KARS-209ENST00000568378 GOLPH3LQ9H4A5 285 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 CBX8Q9HC52 389 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 C1GALT1Q9NS00 363 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 IMP3Q9NV31 184 aaKnown RBP9.27□□□□□ -0.93
KARS-209ENST00000568378 PLA2G3Q9NZ20 509 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 COQ3Q9NZJ6 369 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 PSMD13Q9UNM6 376 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 CTNND2Q9UQB3 1225 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 SEC16AO15027 2179 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 DOCK10Q96BY6 2186 aa9.27□□□□□ -0.93
KARS-209ENST00000568378 CCDC88CQ9P219 2028 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 GSAPA4D1B5 854 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 ANKRD62A6NC57 917 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 MTX2O75431 263 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 KLHL18O94889 574 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 UQCRHP07919 91 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 ERCC2P18074 760 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 POLR2CP19387 275 aaPredicted RBP9.26□□□□□ -0.93
KARS-209ENST00000568378 UGT1A4P22310 534 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 MMP8P22894 467 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 MMP11P24347 488 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 DNASE1P24855 282 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 MMP13P45452 471 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 LMAN1P49257 510 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 TNFSF10P50591 281 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 ADAM8P78325 824 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 ITKQ08881 620 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 MYBPHQ13203 477 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 XRCC4Q13426 336 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 GALNT3Q14435 633 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 TUBB8Q3ZCM7 444 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 ANKRD20A8PQ5CZ79 823 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 ISM2Q6H9L7 571 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 RFX8Q6ZV50 586 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 NOP9Q86U38 636 aaKnown RBP9.26□□□□□ -0.93
KARS-209ENST00000568378 DNAAF3Q8N9W5 541 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 PROKR1Q8TCW9 393 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 ZFPM2Q8WW38 1151 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 GLYATL1Q969I3 302 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 NACC2Q96BF6 587 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 ARSGQ96EG1 525 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 VPS50Q96JG6 964 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 C18orf12Q96KH6 178 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 DHX35Q9H5Z1 703 aaKnown RBP9.26□□□□□ -0.93
KARS-209ENST00000568378 TXLNGQ9NUQ3 528 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 DNAJB12Q9NXW2 375 aaKnown RBP9.26□□□□□ -0.93
KARS-209ENST00000568378 ST6GALNAC2Q9UJ37 374 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 AP4E1Q9UPM8 1137 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 CFAP20Q9Y6A4 193 aaKnown RBP9.26□□□□□ -0.93
KARS-209ENST00000568378 AP1M2Q9Y6Q5 423 aa9.26□□□□□ -0.93
KARS-209ENST00000568378 C17orf113A0A1B0GUU1 675 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 RGSL1A5PLK6 1076 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 FZD6O60353 706 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 PRAMEF2O60811 474 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 CNOT3O75175 753 aaKnown RBP9.25□□□□□ -0.93
KARS-209ENST00000568378 GADD45BO75293 160 aaPredicted RBP9.25□□□□□ -0.93
KARS-209ENST00000568378 OR2B3O76000 313 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 CDK14O94921 469 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 SLCO2B1O94956 709 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 FGFR1OPO95684 399 aaKnown RBP9.25□□□□□ -0.93
KARS-209ENST00000568378 HEXAP06865 529 aa9.25□□□□□ -0.93
KARS-209ENST00000568378 INHBBP09529 407 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms